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All ELIXIR events (Expanded)

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# Event code Title ELIXIR Node Start date End date Duration Event typesort descending Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
401 6125 ELIXIR EXCELERATE Train the Trainer
ELIXIR-EMBL-EBI
21.05.2018
 21.05.2018
1.00 Days
Training - face to face
EXCELERATE
EMBL-EBI
Norwich
United Kingdom
WP11 - TtT
Academia/ Research Institution
NA
Galaxy
15
2
http://www.earlham.ac.uk/elixir-workshop-galaxy-training-material-and-skills-imp...
 ELIXIR-EMBL-EBI
402 6126 ELIXIR EXCELERATE Train the Trainer
ELIXIR-EMBL-EBI
ELIXIR-DE
01.11.2017
 01.11.2017
1.00 Days
Training - face to face
EXCELERATE
EMBL-EBI
Heidelberg
Germany
WP11 - TtT
Academia/ Research Institution
12
https://github.com/TrainTheTrainer/EXCELERATE-TtT/blob/master/TtT_session_1.md
 ELIXIR-EMBL-EBI
403 6127 ELIXIR EXCELERATE Train the Trainer
ELIXIR-EMBL-EBI
ELIXIR-DE
10.10.2018
 11.10.2018
2.00 Days
Training - face to face
EXCELERATE
EMBL-EBI
Heidelberg
Germany
WP11 - TtT
Academia/ Research Institution
NA
NA
7
2
https://tobyhodges.github.io/2018-10-08-ttt-EMBL/
 ELIXIR-EMBL-EBI
404 6128 GDA 2016: From reads to candidate genes.
ELIXIR-ES
28.09.2016
 30.09.2016
3.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
CIPF
Valencia
Spain
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
22
12
http://wikis.babelomics.org/gda16ciberer/doku.php
 ELIXIR-ES
405 6129 GDA 2017. International Course of Genomic Data Analysis
ELIXIR-ES
06.03.2017
 10.03.2017
5.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
CIPF
Valencia
Spain
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
25
12
http://wikis.babelomics.org/gda17/doku.php
 ELIXIR-ES
406 6131 Introduction to metagenomics analysis
ELIXIR-ES
27.10.2017
 28.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
American Society for Microbiology, H3ABioNet, University of Dhar el Marhaz
Fes
Morocco
WP11
Academia/ Research Institution
NA
NA
40
2
https://elixir-europe.org/about-us/who-we-are/nodes/spain
 ELIXIR-ES
407 6132 Multi-omic Integrative Analysis of Gene Expression
ELIXIR-ES
05.03.2018
 08.03.2018
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Centro de Investigación Príncipe Felipe
Valencia
Spain
Academia/ Research Institution
Non-Profit Organisation
Healthcare
NA
NA
25
8
http://conesalab.org/?page_id=1890
 ELIXIR-ES
408 6133 Seminar: R for gene expression studies
ELIXIR-ES
04.04.2018
 05.04.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Malaga
Malaga
Spain
Academia/ Research Institution
NA
NA
20
1
https://elixir-europe.org/about-us/who-we-are/nodes/spain
 ELIXIR-ES
409 6134 A tutorial of hipathia, a mechanistic model of pathway activity
ELIXIR-ES
22.06.2018
 23.06.2018
2.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
Institut Curie, Fundación Progreso y Salud (FPS)
Paris
France
Academia/ Research Institution
NA
NA
20
3
http://courseswiki.clinbioinfosspa.es/dmcm2018/start#a_tutorial_of_hipathia_a_me...
 ELIXIR-ES
410 6135 From reads to disease variants
ELIXIR-ES
17.09.2018
 21.09.2018
5.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
Broad Institute, Fundación Progreso y Salud (FPS)
Seville
Spain
Academia/ Research Institution
NA
NA
30
7
http://courseswiki.clinbioinfosspa.es/gatk2018/
 ELIXIR-ES
411 6136 Seminar: Machine learning for biologists
ELIXIR-ES
09.05.2018
 09.05.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Malaga
Malaga
Spain
Academia/ Research Institution
NA
NA
16
1
http://www.bioinf.jku.at/people/bodenhofer/UMA_ML/
 ELIXIR-ES
412 6138 Nextflow - Reproducible in insilico genomics
ELIXIR-ES
22.11.2018
 23.11.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CRG
Barcelona
Spain
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
34
16
https://www.crg.eu/en/event/coursescrg-nextflow-reproducible-silico-genomics-0
 ELIXIR-ES
413 6139 Nextflow - Reproducible in insilico genomics
ELIXIR-ES
14.09.2017
 15.09.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CRG
Barcelona
Spain
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
37
16
https://www.crg.eu/en/event/coursescrg-nextflow-reproducible-silico-genomics
 ELIXIR-ES
414 6141 Variant analysis workshop
ELIXIR-FI
13.06.2016
 16.06.2016
4.00 Days
Training - face to face
EXCELERATE
CSC
Espoo
Finland
WP11 - TtT
WP11 - TtR
Academia/ Research Institution
NA
NA
54
8
https://csc.fi/web/training/-/variant-analysis?inheritRedirect=true
 ELIXIR-FI
415 6142 Single cell RNA-seq data analysis using Chipster
ELIXIR-FI
19.09.2018
 19.09.2018
1.00 Days
Training - face to face
EXCELERATE
Center for Scientific Computing (CSC) - IT Center for Science
Espoo
Finland
WP11 - TtR
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
24
2
https://www.csc.fi/web/training/-/single-cell-rnaseq-2018
 ELIXIR-FI
416 6143 Single cell RNA-seq data analysis using R and command line tools
ELIXIR-FI
21.09.2018
 21.09.2018
1.00 Days
Training - face to face
EXCELERATE
Center for Scientific Computing (CSC) - IT Center for Science
Espoo
Finland
WP11 - TtR
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
26
2
https://www.csc.fi/web/training/-/single-cell-rnaseq-r-2018
 ELIXIR-FI
417 6144 RNA-seq data analysis with Chipster
ELIXIR-FI
06.03.2019
 06.03.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Center for Scientific Computing (CSC) - IT Center for Science
Espoo
Finland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
24
1
https://www.csc.fi/web/training/-/rnaseq_2019
 ELIXIR-FI
418 6145 Containers, clouds, clusters -combining CSC services in biosciences
ELIXIR-FI
11.03.2019
 12.03.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Center for Scientific Computing (CSC) - IT Center for Science
Espoo
Finland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
24
2
https://www.csc.fi/web/training/-/bioweek-csc-services-2019
 ELIXIR-FI
419 6146 Understanding your data with R
ELIXIR-FI
13.03.2019
 13.03.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Center for Scientific Computing (CSC) - IT Center for Science
Espoo
Finland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
24
1
https://www.csc.fi/web/training/-/gatk2019
 ELIXIR-FI
420 6147 Single cell RNA-seq data analysis using Chipster
ELIXIR-FI
14.03.2019
 15.03.2019
2.00 Days
Training - face to face
EXCELERATE
Center for Scientific Computing (CSC) - IT Center for Science
Espoo
Finland
WP11 - TtR
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
24
2
https://www.csc.fi/en/web/training/-/bioweek-single-cell-chipster-2019
 ELIXIR-FI
421 6148 ELIXIR AAI Training for Relying Services
ELIXIR-FI
ELIXIR-CZ
24.04.2018
 25.04.2018
2.00 Days
Training - face to face
EXCELERATE
CSC
Munich
Germany
WP11 - TtD
Academia/ Research Institution
Compute
NA
20
4
https://www.elixir-czech.cz/events/elixir-aai-training-for-service-providers-apr...
 ELIXIR-FI
422 6151 Metagenomics data analysis
ELIXIR-FI
ELIXIR-NO
03.04.2017
 06.04.2017
4.00 Days
Training - face to face
EXCELERATE
Non-ELIXIR/ Non-EXCELERATE funds
CSC
Espoo
Finland
WP11 - TeSS
Academia/ Research Institution
NA
NA
39
12
https://www.csc.fi/web/training/-/metagenomics
 ELIXIR-FI
423 6153 Summer School 2016 in Metagenomics
ELIXIR-FR
12.09.2016
 16.09.2016
5.00 Days
Training - face to face
EXCELERATE
French Institute of Bioinformatics (IFB), Institut Pasteur
Paris
France
WP11 - TtR
Academia/ Research Institution
NA
NA
104
30
https://www.france-bioinformatique.fr/en/elearning/school/summer_test
 ELIXIR-FR
424 6154 Metagenomics: amplicon analysis under Galaxy
ELIXIR-FR
10.10.2016
 13.10.2016
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB)
Toulouse
France
Academia/ Research Institution
NA
NA
https://tess.elixir-europe.org/events/metagenomics-amplicon-analysis-under-galax...
 ELIXIR-FR
425 6155 Galaxy4Bioinformatics
ELIXIR-FR
18.10.2016
 20.10.2016
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB)
Lyon
France
Academia/ Research Institution
7
https://www.france-bioinformatique.fr/en/evenements/galaxy4bioinformatics
 ELIXIR-FR
426 6157 MicroScope platform: advanced course
ELIXIR-FR
17.11.2016
 18.11.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Genoscope
Paris
France
http://www.genoscope.cns.fr/agc/blog/microscope/?p=904
 ELIXIR-FR
427 6158 5e Ecole de Bioinformatique AVIESAN-IFB
ELIXIR-FR
20.11.2016
 25.11.2016
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB), AVIESAN
Roscoff
France
Academia/ Research Institution
Healthcare
NA
NA
33
30
https://www.france-bioinformatique.fr/en/evenements/EBA2016
 ELIXIR-FR
428 6159 Training on annotation of transposable elements
ELIXIR-FR
20.11.2016
 22.11.2016
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Versailles
France
https://tess.elixir-europe.org/events/detection-et-annotation-des-elements-trans...
 ELIXIR-FR
429 6160 Workflow4Metabolomics
ELIXIR-FR
28.11.2016
 02.12.2016
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB)
Roscoff
France
Academia/ Research Institution
NA
NA
https://workflow4metabolomics.org/training/W4Mcourse2016
 ELIXIR-FR
430 6161 Training R
ELIXIR-FR
10.12.2016
 12.12.2016
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Lyon
France
https://elixir-europe.org/about-us/who-we-are/nodes/france
 ELIXIR-FR
431 6162 European Galaxy Developer Workshop
ELIXIR-FR
16.01.2017
 19.01.2017
4.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
EXCELERATE
French Institute of Bioinformatics (IFB)
Strasbourg
France
WP11 - TtD
Academia/ Research Institution
NA
Galaxy
30
13
https://www.france-bioinformatique.fr/fr/evenements/EGDW2017
 ELIXIR-FR
432 6164 Metabolomics Workshop
ELIXIR-FR
29.05.2017
 02.06.2017
5.00 Days
Training - face to face
EXCELERATE
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB), Institut Pasteur
Paris
France
WP11 - TtR
Academia/ Research Institution
NA
NA
25
http://www.france-bioinformatique.fr/fr/evenements/W4E2017
 ELIXIR-FR
433 6165 Data Analysis boot camp
ELIXIR-FR
06.06.2017
 15.06.2017
10.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Institute Pasteur
Paris
France
https://tess.elixir-europe.org/events/data-analysis-boot-camp
 ELIXIR-FR
434 6167 Bioinformatic and Biostatistic tools in medical genomics
ELIXIR-FR
04.07.2017
 08.07.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB), Genopole
Paris
France
Academia/ Research Institution
NA
NA
20
14
https://www.genopole.fr/IMG/pdf/summerschool_genopole2017.pdf
 ELIXIR-FR
435 6168 Annotation and analysis of prokaryotic genomes using the MicroScope platform
ELIXIR-FR
24.09.2017
 28.09.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB), Genoscope
Essonne
France
Academia/ Research Institution
https://tess.elixir-europe.org/events/annotation-and-analysis-of-procaryotic-gen...
 ELIXIR-FR
436 6170 Training: RNA-seq analysis
ELIXIR-FR
15.11.2017
 17.11.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB)
Lyon
France
Academia/ Research Institution
https://www.france-bioinformatique.fr/fr/formations/analyse-donn%C3%A9es-rna-seq...
 ELIXIR-FR
437 6171 ELIXIR Software Carpentry Workshop
ELIXIR-FR
28.03.2018
 29.03.2018
2.00 Days
Training - face to face
EXCELERATE
French Institute of Bioinformatics (IFB), Institut Pasteur
Paris
France
WP11 - TtR
Academia/ Research Institution
NA
NA
15
2
https://www.france-bioinformatique.fr/en/evenements/software-carpentry
 ELIXIR-FR
438 6172 Bioinformatic and Biostatistic tools in medical genomics (Summer school)
ELIXIR-FR
25.06.2018
 29.06.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB), Genopole
Paris
France
Academia/ Research Institution
NA
NA
20
10
https://www.genopole.fr/spip.php?page=rubrique_event&id_rubrique=1160&event=1108...
 ELIXIR-FR
439 6174 Workflow4metabolomics
ELIXIR-FR
08.10.2018
 12.10.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CEA, CNRS, LABERCA/ONIRIS, INRA, Sorbonne Université,Elixir-FR
Paris
France
Academia/ Research Institution
NA
Metabolomics
Galaxy
23
13
http://workflow4metabolomics.org/W4E2018
 ELIXIR-FR
440 6175 7e Ecole de Bioinformatique AVIESAN-IFB
ELIXIR-FR
25.11.2018
 30.11.2018
6.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
CNRS, INRA, Inserm, AgroParisTech, Institut Curie, Institut Pasteur, Institut Gustave Roussy, ENS, Aix-Marseille Université, Université Paul Sabatier (Toulouse).
Roscoff
France
Academia/ Research Institution
NA
NA
40
35
http://france-bioinformatique.fr/en/evenements/EBAI2018
 ELIXIR-FR
441 6176 Ecole Single-cell 2019 (Single-cell transcriptomics and epigenomics: theory and practice)
ELIXIR-FR
03.02.2019
 08.02.2019
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Institut Curie, INSERM U900, Mines ParisTech, C3BI USR 3756 IP CNRS, UCAGenomiX IPMC CNRS, Institut Imagine, INSERM UMR-1163, IBENS CNRS UMR8197, ENS, INSERM U1024, Institut Pasteur UMR3738
Roscoff
France
Academia/ Research Institution
NA
NA
30
11
https://www.france-bioinformatique.fr/en/evenements/sincellTE_2019
 ELIXIR-FR
442 6179 Bioschemas, a lightway approach to enable FAIRer data resources
ELIXIR-FR
ELIXIR-Hub
ELIXIR-EMBL-EBI
22.10.2018
 22.10.2018
1.00 Days
Training - face to face
ELIXIR Hub
Non-ELIXIR/ Non-EXCELERATE funds
Elixir-FR, EBI et Elixir-Hub
Genoa
Italy
Academia/ Research Institution
Interoperability
NA
22
4
http://www.igst.it/nettab/2018/programme/tutorials/#Tutorial1
 ELIXIR-FR
443 6180 ELIXIR EXCELERATE Train the Trainer
ELIXIR-FR
ELIXIR-IT
ELIXIR-CH
26.03.2018
 27.03.2018
2.00 Days
Training - face to face
EXCELERATE
French Institute of Bioinformatics (IFB)
Paris
France
WP11 - TtT
Academia/ Research Institution
NA
NA
12
2
https://elixir-iib-training.github.io/website/2018/03/26/train-the-trainer-paris...
 ELIXIR-FR
444 6181 Elixir Training: Plant Genome Assembly and Annotation
ELIXIR-FR
ELIXIR-NO
ELIXIR-SI
24.09.2018
 28.09.2018
5.00 Days
Training - face to face
EXCELERATE
Elixir-FR et CIRAD
Montipellier
France
WP10
Academia/ Research Institution
NA
NA
24
8
https://elixir.mf.uni-lj.si/enrol/index.php?id=33
 ELIXIR-FR
445 6182 An introduction to the Galaxy platform for computational biology
ELIXIR-GR
05.11.2018
 05.11.2018
1.00 Days
Training - face to face
ELIXIR Node
ICS/FORTH
Crete
Greece
Academia/ Research Institution
NA
NA
30
2
https://www.ics.forth.gr/index_main.php?l=e&n=4&id=531
 ELIXIR-GR
446 6183 Advanced RNASeq and ChIPSeq data analysis – Hands-on Workshop
ELIXIR-GR
15.11.2018
 15.11.2018
1.00 Days
Training - face to face
ELIXIR Node
CERTH / Hellenic Bioinformatics
Thessalonica
Greece
Academia/ Research Institution
NA
NA
28
2
https://hscbio.wordpress.com/conferences-when/2018-2/hb-11-workshops/
 ELIXIR-GR
447 6184 Proteomics & Bioinformatics Hands-on Workshop: From raw MS-data to knowledge
ELIXIR-GR
15.11.2018
 15.11.2018
1.00 Days
Training - face to face
ELIXIR Node
CERTH / Hellenic Bioinformatics
Thessalonica
Greece
Academia/ Research Institution
NA
NA
29
4
https://hscbio.wordpress.com/conferences-when/2018-2/hb-11-workshops/
 ELIXIR-GR
448 6185 Prediction of Structure and Function of Proteins
ELIXIR-GR
14.12.2018
 16.12.2018
3.00 Days
Training - face to face
ELIXIR Node
UTH
Lamia
Greece
Academia/ Research Institution
NA
NA
28
5
https://www.compgen.org/ELIXIR
 ELIXIR-GR
449 6186 ELIXIR/CODATA-RDA Advanced Bioinformatics Workshop
ELIXIR-GR
ELIXIR-NL
20.08.2018
 24.08.2018
5.00 Days
Training - face to face
ELIXIR Node
CODATA-RDA, DTL, CERTH, H3ABioNet, GOBLET
Trieste
Italy
Academia/ Research Institution
NA
NA
24
3
http://codata-rda-advanced-bioinformatics-2018.readthedocs.io
 ELIXIR-GR
450 6187 RNA-Sequencing data analysis using the Galaxy platform
ELIXIR-HU
01.02.2018
 02.02.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Debrecen
Debrecen
Hungary
Academia/ Research Institution
NA
NA
22
1
https://www.dropbox.com/s/xbzblultyg36sfv/EFOP_Galaxy_Practical_20180206.pdf?dl=...
 ELIXIR-HU
CSV