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# Event code Title ELIXIR Node Start date End date Duration Event type Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
1651 5912 RNA-seq and ChIP-seq data analysis with Chipster
ELIXIR-CZ
01.06.2016
 02.06.2016
2.00 Days
Training - face to face
EXCELERATE
IOCB AS CR
Prague
Czech Republic
WP11 - TtR
Academia/ Research Institution
NA
NA
https://www.google.com
 ELIXIR-CZ
1652 6140 Using clouds and virtual machines in bioinformatics training
ELIXIR-FI
23.05.2016
 25.05.2016
3.00 Days
Knowledge exchange workshop
EXCELERATE
CSC
Espoo
Finland
WP11 - TtT
WP11 - TtR
Academia/ Research Institution
NA
NA
30
22
https://csc.fi/web/training/-/cloud-vm-bioinformatics
 ELIXIR-FI
1653 6361 Image Analysis for Biologists
ELIXIR-UK
19.05.2016
 20.05.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
30
3
https://training.csx.cam.ac.uk/bioinformatics/event/1706338
 ELIXIR-UK
1654 6152 Elixir Technical Hackathon : Tools, Workflow and Workbenches
ELIXIR-FR
18.05.2016
 20.05.2016
3.00 Days
Hackathon
EXCELERATE
French Institute of Bioinformatics (IFB)
Gif-sur-Yvette
France
WP11 - TtD
Academia/ Research Institution
Tools
Data
Galaxy
30
2
https://www.france-bioinformatique.fr/en/evenements/technical_hackathon
 ELIXIR-FR
1655 6360 Data Carpentry Workshop
ELIXIR-UK
16.05.2016
 17.05.2016
2.00 Days
Training - face to face
ELIXIR Node
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
34
3
https://training.csx.cam.ac.uk/bioinformatics/event/1572489
 ELIXIR-UK
1656 6114 High-throughput data analysis with g:Profiler, MEM and ClustVis
ELIXIR-EE
12.05.2016
 12.05.2016
1.00 Days
Training - face to face
ELIXIR Node
EXCELERATE
University of Tartu
Cambridge
United Kingdom
WP11 - TtR
Tools
17
1
https://training.csx.cam.ac.uk/bioinformatics/event/1776134
 ELIXIR-EE
1657 6612 ELIXIR-EXCELERATE Train the Trainer
ELIXIR-UK
ELIXIR-EMBL-EBI
10.05.2016
 11.05.2016
2.00 Days
Training - face to face
EXCELERATE
University of Cambridge, EMBL-EBI
Cambridge
United Kingdom
WP11 - TtT
Academia/ Research Institution
NA
NA
12
2
https://training.csx.cam.ac.uk/bioinformatics/event/1769665
 ELIXIR-UK
1658 6359 Data Analysis and Visualisation in R
ELIXIR-UK
09.05.2016
 09.05.2016
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
40
2
https://training.csx.cam.ac.uk/bioinformatics/event/1753183
 ELIXIR-UK
1659 6810 NGS for evolutionary biologists: from basic scripting to variant calling
ELIXIR-IT
02.05.2016
 06.05.2016
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Institute of Genetics and Biophysics CNR
Rome
Italy
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
21
3
https://elixir-europe.org/events/ngs-evolutionary-biologists-basic-scripting-var...
 ELIXIR-IT
1660 6358 Analysis of high-throughput sequencing data with Bioconductor
ELIXIR-UK
27.04.2016
 29.04.2016
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
33
5
https://training.csx.cam.ac.uk/bioinformatics/event/1614561
 ELIXIR-UK
1661 6357 Statistical Analysis using R
ELIXIR-UK
26.04.2016
 26.04.2016
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
31
2
https://training.csx.cam.ac.uk/bioinformatics/event/1572922
 ELIXIR-UK
1662 6356 Molecular Phylogenetics
ELIXIR-UK
20.04.2016
 22.04.2016
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
31
5
https://training.csx.cam.ac.uk/bioinformatics/event/1572213
 ELIXIR-UK
1663 6355 Introduction to genome variation analysis using NGS
ELIXIR-UK
18.04.2016
 19.04.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
33
2
https://training.csx.cam.ac.uk/bioinformatics/event/1572220
 ELIXIR-UK
1664 6354 Network Visualisation and Analysis of Biological Data
ELIXIR-UK
14.04.2016
 15.04.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
36
2
https://training.csx.cam.ac.uk/bioinformatics/event/1689103
 ELIXIR-UK
1665 6353 R object-oriented programming and package development
ELIXIR-UK
11.04.2016
 11.04.2016
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
24
2
https://training.csx.cam.ac.uk/bioinformatics/event/1572380
 ELIXIR-UK
1666 6352 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
07.04.2016
 08.04.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
32
2
https://training.csx.cam.ac.uk/bioinformatics/event/1621818
 ELIXIR-UK
1667 6625 ELIXIR/GOBLET hackathon for metagenomic training material re-use
ELIXIR-EMBL-EBI
ELIXIR-IT
ELIXIR-NL
ELIXIR-PT
ELIXIR-UK
07.04.2016
 08.04.2016
2.00 Days
Hackathon
EXCELERATE
University of Cambridge, EMBL-EBI, GOBLET
Hinxton
United Kingdom
WP11 - TtT
WP11 - TtR
Academia/ Research Institution
NA
NA
19
6
https://docs.google.com/document/d/13Jc_uN0-1WTBqGuNF6iASFB4AlpP4C7Ge19FF5ZeOSE/...
 ELIXIR-UK
1668 6351 How to get started with sequencing analysis: the metagenomics example
ELIXIR-UK
06.04.2016
 06.04.2016
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
24
1
https://training.csx.cam.ac.uk/bioinformatics/event/1726439
 ELIXIR-UK
1669 6809 High Performance Molecular Dynamics
ELIXIR-IT
05.04.2016
 07.04.2016
3.00 Days
Training - face to face
ELIXIR Node
CINECA
Rome
Italy
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
20
4
http://www.hpc.cineca.it/sites/default/files/u153/Agenda_HPMD_RM.pdf
 ELIXIR-IT
1670 6350 An Introduction to Solving Biological Problems with R
ELIXIR-UK
04.04.2016
 05.04.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
32
2
https://training.csx.cam.ac.uk/bioinformatics/event/1614521
 ELIXIR-UK
1671 6177 Hackathon Bioinformatique
ELIXIR-FR
ELIXIR-DK
24.03.2016
 25.03.2016
2.00 Days
Hackathon
EXCELERATE
French Institute of Bioinformatics (IFB)
Gif-sur-Yvette
France
WP11 - TtD
Academia/ Research Institution
Tools
NA
20
2
https://www.france-bioinformatique.fr/en/evenements/IFB-Elixir
 ELIXIR-FR
1672 6349 An Introduction to MATLAB for biologists
ELIXIR-UK
21.03.2016
 22.03.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
34
2
https://training.csx.cam.ac.uk/bioinformatics/event/1572602
 ELIXIR-UK
1673 6348 Introduction to high-throughput sequencing data analysis
ELIXIR-UK
15.03.2016
 18.03.2016
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
33
7
https://training.csx.cam.ac.uk/bioinformatics/event/1614800
 ELIXIR-UK
1674 5916 ELIXIR AAI training
ELIXIR-CZ
ELIXIR-FI
15.03.2016
 16.03.2016
2.00 Days
Training - face to face
EXCELERATE
AARC project
Manchester
United Kingdom
WP4
Academia/ Research Institution
NA
NA
12
2
http://anenadic.github.io/2016-03-15-elixir-aai-workshop-manchester
 ELIXIR-CZ
1675 6347 Using the Ensembl Genome Browser
ELIXIR-UK
14.03.2016
 14.03.2016
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
28
1
https://training.csx.cam.ac.uk/bioinformatics/event/1614646
 ELIXIR-UK
1676 6346 An Introduction to Solving Biological Problems with PERL
ELIXIR-UK
10.03.2016
 11.03.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
24
2
https://training.csx.cam.ac.uk/bioinformatics/event/1572695
 ELIXIR-UK
1677 6629 "Training" and "metadata searching" meetings
ELIXIR-ES
ELIXIR-UK
09.03.2016
 10.03.2016
2.00 Days
Knowledge exchange workshop
EXCELERATE
CRG, University of Manchester
Barcelona
Spain
WP11 - TeSS
Academia/ Research Institution
NA
NA
15
https://docs.google.com/document/d/11A9o3tv8ES43LenQ-Tvssu1YwEnLHdxRWixn9I-0S3E/...
 ELIXIR-UK
1678 6345 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
25.02.2016
 26.02.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
32
2
https://training.csx.cam.ac.uk/bioinformatics/event/1572827
 ELIXIR-UK
1679 6344 Analysis of single cell RNA-seq data
ELIXIR-UK
24.02.2016
 24.02.2016
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
3
https://training.csx.cam.ac.uk/bioinformatics/event/1626698
 ELIXIR-UK
1680 6343 An Introduction to Solving Biological Problems with R
ELIXIR-UK
18.02.2016
 19.02.2016
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
37
2
https://training.csx.cam.ac.uk/bioinformatics/event/1572428
 ELIXIR-UK
1681 6149 RNA-seq data analysis with Chipster
ELIXIR-FI
ELIXIR-CZ
ELIXIR-SI
16.02.2016
 17.02.2016
2.00 Days
Training - blended
EXCELERATE
University of Chemistry and Technology, Prague
Prague
Czech Republic
WP11 - TtR
Academia/ Research Institution
NA
NA
12
3
https://www.csc.fi/web/training/events
 ELIXIR-FI
1682 6342 Analysis of mapped NGS data with SeqMonk
ELIXIR-UK
03.02.2016
 03.02.2016
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
25
2
https://training.csx.cam.ac.uk/bioinformatics/event/1572361
 ELIXIR-UK
1683 6341 ELIXIR EXCELERATE Train the Trainer and Training Impact workshop
ELIXIR-UK
19.01.2016
 21.01.2016
3.00 Days
Knowledge exchange workshop
EXCELERATE
University of Cambridge, EMBL-EBI
Hinxton
United Kingdom
WP11 - TtT
WP11 - QandI
Academia/ Research Institution
NA
NA
25
2
https://docs.google.com/document/d/1HzD8_lF2yGFtahEcoeYYZoQiQuKHDbiDxMeqaxNB3XM/...
 ELIXIR-UK
1684 6113 High-throughput data analysis with g:Profiler, MEM and ClustVis
ELIXIR-EE
13.01.2016
 13.01.2016
1.00 Days
Training - face to face
ELIXIR Node
University of Tartu
Oxford
United Kingdom
Tools
21
2
https://elixir.ut.ee/training
 ELIXIR-EE
1685 5777 ELIXIR Data and Software Carpentry Instructor Training
ELIXIR-CH
13.01.2016
 14.01.2016
2.00 Days
Training - face to face
ELIXIR Node
SIB Swiss Institute of Bioinformatics, University of Cambridge
Lausanne
Switzerland
Academia/ Research Institution
NA
NA
20
2
http://swcarpentry.github.io/2016-01-13-instructor-training-lausanne/
 ELIXIR-CH
1686 6340 An Introduction to Solving Biological Problems with R
ELIXIR-UK
16.12.2015
 17.12.2015
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
44
2
https://training.csx.cam.ac.uk/bioinformatics/event/1568450
 ELIXIR-UK
1687 6611 EMBL-EBI: Transcriptomics Data and Tools
ELIXIR-UK
ELIXIR-EMBL-EBI
15.12.2015
 15.12.2015
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
20
1
https://training.csx.cam.ac.uk/bioinformatics/event/1393017
 ELIXIR-UK
1688 6806 Protein Networks and Systems Biology
ELIXIR-IT
14.12.2015
 18.12.2015
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Bologna
Bologna
Italy
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
6
http://bioinformatics.it/courses/detail/1071/protein-networks-and-systems-biolog...
 ELIXIR-IT
1689 6339 Introduction to RNA-seq and ChIP-seq data analysis
ELIXIR-UK
10.12.2015
 11.12.2015
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
31
1
https://training.csx.cam.ac.uk/bioinformatics/event/1544785
 ELIXIR-UK
1690 6338 Image Analysis for Biologists
ELIXIR-UK
07.12.2015
 09.12.2015
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
40
5
https://training.csx.cam.ac.uk/bioinformatics/event/1544771
 ELIXIR-UK
1691 6337 Introduction to Scientific Figure Design
ELIXIR-UK
04.12.2015
 04.12.2015
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
33
3
https://training.csx.cam.ac.uk/bioinformatics/event/1503983
 ELIXIR-UK
1692 6336 Bioinformatics resources for exploring disease related data
ELIXIR-UK
03.12.2015
 03.12.2015
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
29
4
https://training.csx.cam.ac.uk/bioinformatics/event/1650733
 ELIXIR-UK
1693 6335 Analysis of high-throughput sequencing data with Bioconductor
ELIXIR-UK
30.11.2015
 02.12.2015
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
36
4
https://training.csx.cam.ac.uk/bioinformatics/event/1528113
 ELIXIR-UK
1694 6218 Managing and Integrating Life Science Information
ELIXIR-NL
30.11.2015
 04.12.2015
5.00 Days
Training - face to face
EXCELERATE
BioSB, SURFacademy
Utrecht
Netherlands
WP11 - TtR
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
10
7
https://www.biosb.nl/archive-courses/course-managing-and-integrating-life-scienc...
 ELIXIR-NL
1695 6334 Using the Ensembl Genome Browser
ELIXIR-UK
27.11.2015
 27.11.2015
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
30
2
https://training.csx.cam.ac.uk/bioinformatics/event/1528909
 ELIXIR-UK
1696 6333 Biological data analysis using InterMine
ELIXIR-UK
26.11.2015
 26.11.2015
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
12
1
https://training.csx.cam.ac.uk/bioinformatics/event/1539952
 ELIXIR-UK
1697 6332 Software and Data Carpentry's "Instructor Training" Workshop
ELIXIR-UK
23.11.2015
 24.11.2015
2.00 Days
Training - face to face
EXCELERATE
University of Machester
Manchester
United Kingdom
WP11 - TtR
Academia/ Research Institution
NA
NA
25
3
http://anenadic.github.io/2015-11-23-instructor-training-manchester/
 ELIXIR-UK
1698 6807 NGS for evolutionary biologists: from basic scripting to variant calling
ELIXIR-IT
23.11.2015
 27.11.2015
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CINECA, Sapienza University of Rome
Rome
Italy
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
Compute
NA
22
6
https://github.com/ELIXIR-IIB-training/VarCall2015/blob/master/README.md
 ELIXIR-IT
1699 6610 EMBL-EBI: Network Analysis with Cytoscape and PSICQUIC
ELIXIR-UK
ELIXIR-EMBL-EBI
18.11.2015
 18.11.2015
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
19
1
https://training.csx.cam.ac.uk/bioinformatics/event/1538946
 ELIXIR-UK
1700 6609 EMBL-EBI: Introduction to ontologies
ELIXIR-UK
ELIXIR-EMBL-EBI
04.11.2015
 04.11.2015
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
9
2
https://training.csx.cam.ac.uk/bioinformatics/event/1555216
 ELIXIR-UK
CSV