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# Event code Title ELIXIR Node Start date End date Duration Event type Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
401 6781 Clinical bioinformatics for microbial genomics and metagenomics - ESCMID, CHUV, SIB
ELIXIR-CH
09.09.2019
12.09.2019
4.00 Days
Training - face to face
ELIXIR Node
SIB Swiss Institute of Bioinformatics, CHUV, ESCMID
Lausanne
Switzerland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
52
14
ELIXIR-CH
402 6783 Computational PANGenomics
ELIXIR-PT
09.09.2019
13.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Instituto Gulbenkian de Ciência
Oeiras
Portugal
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
19
2
ELIXIR-PT
403 6791 Dresden Deep Learning Hackathon
ELIXIR-DE
09.09.2019
13.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CSBD Dresden
Dresden
Germany
Academia/ Research Institution
NA
NA
35
2
ELIXIR-DE
404 7020 Introducing UTAP: User-friendly Transcriptome Analysis Pipeline
ELIXIR-IL
09.09.2019
09.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Weizmann Institute of Science
Rehovot
Israel
Academia/ Research Institution
NA
NA
20
3
ELIXIR-IL
405 6775 Introduction to Machine Learning: Opportunities for advancing omics data analysis
ELIXIR-CH
ELIXIR-GR
09.09.2019
09.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
INAB-CERTH, H3ABioNet
Basel
Switzerland
Academia/ Research Institution
Industry
Healthcare
NA
NA
29
2
ELIXIR-GR
406 6845 Introduction to R for Biologists
ELIXIR-UK
09.09.2019
10.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
42
3
ELIXIR-UK
407 6930 Omics Integration and Systems Biology
ELIXIR-SE
09.09.2019
12.09.2019
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS
Stockholm
Sweden
Academia/ Research Institution
NA
NA
23
8
ELIXIR-SE
408 6790 RNA-Seq data analysis with Galaxy for clinical applications - GMDS 2019
ELIXIR-DE
08.09.2019
08.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Rostock
Dortmund
Germany
Academia/ Research Institution
NA
NA
4
2
ELIXIR-DE
409 6874 Network Analysis of Higher Dimensional Biological Data
ELIXIR-UK
06.09.2019
06.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
14
1
ELIXIR-UK
410 6844 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
05.09.2019
06.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
43
2
ELIXIR-UK
411 6789 2nd de.NBI Cloud User Meeting
ELIXIR-DE
03.09.2019
05.09.2019
3.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
de.NBI
Heidelberg
Germany
Academia/ Research Institution
NA
NA
49
13
ELIXIR-DE
412 7005 Analysis of bulk RNA
ELIXIR-UK
02.09.2019
04.09.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
45
4
ELIXIR-UK
413 6816 Analysis of bulk RNA-seq data
ELIXIR-UK
02.09.2019
04.09.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
Industry
NA
NA
45
4
ELIXIR-UK
414 6788 de.NBI Summer School 2019 - (Bio)Data Science
ELIXIR-DE
02.09.2019
06.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
IPK Gatersleben
Gatersleben
Germany
Academia/ Research Institution
NA
Plant Sciences
Proteomics
Metabolomics
17
10
ELIXIR-DE
415 6804 ELIXIR-EXCELERATE Train-the-trainer Course
ELIXIR-NL
29.08.2019
30.08.2019
2.00 Days
Training - face to face
EXCELERATE
ELIXIR Node
ELIXIR Hub
DTL/ELIXIR-NL
Utrecht
Netherlands
WP11 - TtT
Academia/ Research Institution
NA
NA
14
2
ELIXIR-NL
416 6873 Metabarcoding and Metagenomics
ELIXIR-UK
28.08.2019
30.08.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
5
3
ELIXIR-UK
417 6805 Getting started on the high-throughput data processing platform
ELIXIR-NL
28.08.2019
28.08.2019
1.00 Days
Training - face to face
EXCELERATE
SURFsara
Utrecht
Netherlands
WP11 - TtR
WP11 - TtD
Academia/ Research Institution
Compute
NA
4
3
ELIXIR-NL
418 6782 Advanced Statistics: Statistical Modeling
ELIXIR-CH
19.08.2019
22.08.2019
4.00 Days
Training - face to face
ELIXIR Node
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
25
3
ELIXIR-CH
419 6774 ELIXIR / CODATA-RDA Research Data Science Advanced Workshop on Bioinformatics
ELIXIR-GR
ELIXIR-NL
19.08.2019
23.08.2019
5.00 Days
Training - face to face
ELIXIR Platform
CERTH, H3ABioNet, CODATA-RDA, DTL
Trieste
Italy
Academia/ Research Institution
NA
NA
19
3
ELIXIR-GR
420 6787 Analyzing metabolic networks with CellNetAnalyzer - MPA
ELIXIR-DE
12.08.2019
12.08.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
MPI Magdeburg
Riga
Latvia
Academia/ Research Institution
NA
NA
20
3
ELIXIR-DE
421 6872 Introduction to RNA-seq Data Analysis
ELIXIR-UK
05.08.2019
09.08.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
25
3
ELIXIR-UK
422 6785 CSAMA 2019 - Statistical Data Analysis for Genome-Scale Biology
ELIXIR-DE
21.07.2019
26.07.2019
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
de.NBI
Brixen
Italy
Academia/ Research Institution
NA
NA
72
14
ELIXIR-DE
423 6786 Tools for reproducible research - ISMB/ECCB 2019
ELIXIR-DE
21.07.2019
21.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Freiburg University
Basel
Switzerland
Academia/ Research Institution
NA
Galaxy
30
3
ELIXIR-DE
424 6654 4 Simple recommendations for Open Source Software
ELIXIR-GR
ELIXIR-IT
ELIXIR-NL
17.07.2019
19.07.2019
3.00 Days
Training - face to face
ELIXIR Node
ELIXIR Hub
Center for Research and Technology Hellas, Athena Research Center
Athens
Greece
Academia/ Research Institution
NA
NA
11
3
ELIXIR-GR
425 6784 An Introduction to ChIP-seq Data Analysis
ELIXIR-DE
16.07.2019
16.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
UKE Hamburg
Hamburg
Germany
Academia/ Research Institution
NA
NA
4
2
ELIXIR-DE
426 6871 Network Analysis of High Dimensional Biological Data
ELIXIR-UK
15.07.2019
15.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
20
1
ELIXIR-UK
427 6653 Carpentry Instructor Training
ELIXIR-GR
ELIXIR-IT
ELIXIR-NL
15.07.2019
17.07.2019
3.00 Days
Training - face to face
ELIXIR Node
ELIXIR Hub
Center for Research and Technology Hellas, Athena Research Center
Athens
Greece
Academia/ Research Institution
NA
NA
13
3
ELIXIR-GR
428 6754 Statistical Analysis using R
ELIXIR-UK
12.07.2019
12.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
35
1
ELIXIR-UK
429 6870 Introduction to Python for Biologists
ELIXIR-UK
08.07.2019
12.07.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
8
1
ELIXIR-UK
430 6678 Image Processing for Electron Microscopy and hybrid modelling
ELIXIR-ES
08.07.2019
11.07.2019
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
National Center for Biotechnology (CNB)
Madrid
Spain
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
20
4
ELIXIR-ES
431 6753 Variant Discovery with GATK
ELIXIR-UK
08.07.2019
11.07.2019
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
38
4
ELIXIR-UK
432 6648 Software Carpentry Workshop
ELIXIR-IT
03.07.2019
05.07.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CNR
Napoli
Italy
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
25
4
ELIXIR-IT
433 6672 ELIXIR-SIB Data Carpentry with R
ELIXIR-CH
01.07.2019
02.07.2019
2.00 Days
Training - face to face
EXCELERATE
ELIXIR Node
SIB
Zurich
Switzerland
WP11 - TtR
WP11
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
4
ELIXIR-CH
434 6963 Genome Assembly and Annotation Course 5
ELIXIR-FR
ELIXIR-IT
ELIXIR-SE
ELIXIR-SI
01.07.2019
05.07.2019
5.00 Days
Training - face to face
EXCELERATE
University of Milano-Bicocca
Milan
Italy
WP11 - eLearning
WP10
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
6
ELIXIR-SI
435 6752 Summer School - Bioinformatics for Biologists: An introduction to Data Exploration, Statistics and Reproducibility
ELIXIR-UK
01.07.2019
05.07.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
48
10
ELIXIR-UK
436 6735 An introduction to metabolomics and its application in life-sciences
ELIXIR-UK
27.06.2019
28.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
36
3
ELIXIR-UK
437 6706 Image Processing & Analysis with ilastik
ELIXIR-DE
27.06.2019
27.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBl Heidelberg
Heidelberg
Germany
Academia/ Research Institution
NA
NA
19
1
ELIXIR-DE
438 6749 Research data management and stewardship
ELIXIR-LU
25.06.2019
26.06.2019
2.00 Days
Training - face to face
ELIXIR Implementation Study
Elixir-Luxembourg
Belval
Luxembourg
Academia/ Research Institution
NA
NA
20
5
ELIXIR-LU
439 6734 Image Analysis for Biologists
ELIXIR-UK
24.06.2019
26.06.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
42
3
ELIXIR-UK
440 6712 Statistics in Omics
ELIXIR-NL
24.06.2019
28.06.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
BioSB
Amsterdam
Netherlands
Academia/ Research Institution
NA
NA
30
5
ELIXIR-NL
441 6705 dais Learnathon 2019
ELIXIR-DE
23.06.2019
29.06.2019
7.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
CSBD Dresden
Dresden
Germany
Academia/ Research Institution
NA
NA
12
10
ELIXIR-DE
442 6704 Metabolomics Data Clinic June 2019
ELIXIR-DE
21.06.2019
21.06.2019
1.00 Days
Training - elearning
Non-ELIXIR/ Non-EXCELERATE funds
IPB Halle
Online
Online
Academia/ Research Institution
NA
Metabolomics
0
3
ELIXIR-DE
443 6733 Protein Structure Analysis
ELIXIR-UK
20.06.2019
21.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
16
5
ELIXIR-UK
444 6731 Biological data analysis using InterMine (User Interface)
ELIXIR-UK
19.06.2019
19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
8
1
ELIXIR-UK
445 6732 Biological data analysis using the InterMine API
ELIXIR-UK
19.06.2019
19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
11
2
ELIXIR-UK
446 6671 Introduction to high-performance computing (sciCORE cluster)
ELIXIR-CH
19.06.2019
19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB
Basel
Switzerland
WP11
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
1
ELIXIR-CH
447 6730 An Introduction to MATLAB for biologists
ELIXIR-UK
17.06.2019
18.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
26
3
ELIXIR-UK
448 6703 Applied Metaproteomics Workshop 2019
ELIXIR-DE
17.06.2019
21.07.2019
35.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Magdeburg
Magdeburg
Germany
Academia/ Research Institution
NA
Proteomics
9
4
ELIXIR-DE
449 6912 ELIXIR AAI Training for Relying Services
ELIXIR-CZ
ELIXIR-FI
17.06.2019
17.06.2019
1.00 Days
Knowledge exchange workshop
EXCELERATE
Masaryk University
Lisbon
Portugal
WP4
Academia/ Research Institution
Compute
NA
22
2
ELIXIR-UK
450 6729 Data Science in Python
ELIXIR-UK
13.06.2019
14.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
35
3
ELIXIR-UK
CSV