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All ELIXIR events (Expanded)

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# Event code Title ELIXIR Node Start datesort descending End date Duration Event type Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
651 5868 Long reads applied to plant genome assembling
ELIXIR-CH
20.06.2018
 21.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
NA
NA
18
5
https://www.sib.swiss/training/course/2018-06-Long-Reads
 ELIXIR-CH
652 6550 Statistics for Biologists in R
ELIXIR-UK
21.06.2018
 22.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
1
https://training.csx.cam.ac.uk/bioinformatics/event/2534302
 ELIXIR-UK
653 6134 A tutorial of hipathia, a mechanistic model of pathway activity
ELIXIR-ES
22.06.2018
 23.06.2018
2.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
Institut Curie, Fundación Progreso y Salud (FPS)
Paris
France
Academia/ Research Institution
NA
NA
20
3
http://courseswiki.clinbioinfosspa.es/dmcm2018/start#a_tutorial_of_hipathia_a_me...
 ELIXIR-ES
654 6231 BioSB Algorithms in Biological Networks
ELIXIR-NL
25.06.2018
 29.06.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
BioSB
Wageningen
Netherlands
Academia/ Research Institution
NA
NA
13
6
https://www.biosb.nl/archive-courses/algorithms-for-biological-networks-2018/
 ELIXIR-NL
655 5869 De novo RNA-Seq assembly workshop
ELIXIR-CH
25.06.2018
 26.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
18
1
https://biologie.cuso.ch/index.php?id=1741&L=0&tx_displaycontroller%5BshowUid%5D...
 ELIXIR-CH
656 6172 Bioinformatic and Biostatistic tools in medical genomics (Summer school)
ELIXIR-FR
25.06.2018
 29.06.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB), Genopole
Paris
France
Academia/ Research Institution
NA
NA
20
10
https://www.genopole.fr/spip.php?page=rubrique_event&id_rubrique=1160&event=1108...
 ELIXIR-FR
657 6208 BITS 2018 Tutorial on Docker and Reproducibility
ELIXIR-IT
25.06.2018
 26.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CNR, BITS
Torino
Italy
Academia/ Research Institution
NA
NA
14
3
https://elixir-iib-training.github.io/website/2018/06/25/BITS_Docker_Torino.html
 ELIXIR-IT
658 6232 WAAS: Course Data management and computational workflows
ELIXIR-NL
25.06.2018
 25.06.2018
1.00 Days
Training - face to face
ELIXIR Implementation Study
ELIXIR Node
SURFsara
Amsterdam
Netherlands
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
20
https://www.surf.nl/en/agenda/2018/06/course-data-management-and-computational-w...
 ELIXIR-NL
659 6551 An Introduction to MATLAB for biologists
ELIXIR-UK
25.06.2018
 26.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
28
3
https://training.csx.cam.ac.uk/bioinformatics/event/2505664
 ELIXIR-UK
660 5769 Introduction to Galaxy
ELIXIR-BE
26.06.2018
 26.06.2018
1.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
VIB
Ghent
Belgium
Academia/ Research Institution
Non-Profit Organisation
NA
NA
7
1
https://hackmd-ce.herokuapp.com/p/Skq-YwqWQ
 ELIXIR-BE
661 6049 Introduction to Linux Command Line & Basic Scripting
ELIXIR-DE
26.06.2018
 27.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
NA
18
3
https://www.denbi.de/training-archive-sorted-according-by-date/2018/82-introduct...
 ELIXIR-DE
662 5870 Single cell transcriptome workshop
ELIXIR-CH
27.06.2018
 28.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
33
1
https://www.sib.swiss/training/course/2018-06-single-cell-transcriptome
 ELIXIR-CH
663 6050 A primer for RNA-Seq processing, interpreting and visualization
ELIXIR-DE
27.06.2018
 29.06.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Rostock
Jena
Germany
Academia/ Research Institution
NA
Galaxy
13
3
https://www.denbi.de/training-archive-sorted-according-by-date/2018/114-a-primer...
 ELIXIR-DE
664 6552 Analysis of DNA Methylation using Sequencing
ELIXIR-UK
27.06.2018
 27.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
32
2
https://training.csx.cam.ac.uk/bioinformatics/event/2426618
 ELIXIR-UK
665 6553 Data Carpentry in R
ELIXIR-UK
28.06.2018
 29.06.2018
2.00 Days
Training - face to face
ELIXIR Node
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
39
4
https://training.csx.cam.ac.uk/bioinformatics/event/2463814
 ELIXIR-UK
666 6554 An introduction to metabolomics and its application in life-sciences
ELIXIR-UK
02.07.2018
 03.07.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
34
3
https://training.csx.cam.ac.uk/bioinformatics/event/2463063
 ELIXIR-UK
667 6051 How to Share FAIR — The FAIRDOM Data and Model Management Practice – SBMC 2018
ELIXIR-DE
04.07.2018
 04.07.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
HITS
Bremen
Germany
Academia/ Research Institution
NA
NA
5
2
https://www.denbi.de/training-archive-sorted-according-by-date/2018/115-how-to-s...
 ELIXIR-DE
668 6555 Working with Python: functions and modules
ELIXIR-UK
04.07.2018
 04.07.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
30
2
https://training.csx.cam.ac.uk/bioinformatics/event/2481914
 ELIXIR-UK
669 6556 R object-oriented programming and package development
ELIXIR-UK
06.07.2018
 06.07.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
31
2
https://training.csx.cam.ac.uk/bioinformatics/event/2480552
 ELIXIR-UK
670 6052 CSAMA 2018
ELIXIR-DE
08.07.2018
 13.07.2018
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Bressanone-Brixen
Italy
Academia/ Research Institution
NA
NA
73
10
https://www.denbi.de/training-archive-sorted-according-by-date/2018/117-csama-20...
 ELIXIR-DE
671 6557 Image Analysis for Biologists
ELIXIR-UK
09.07.2018
 11.07.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
3
https://training.csx.cam.ac.uk/bioinformatics/event/2495657
 ELIXIR-UK
672 6558 Advanced Python for Biologists
ELIXIR-UK
09.07.2018
 13.07.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Edingburgh Genomics University of Edingburgh
Edingburgh
United Kingdom
Academia/ Research Institution
NA
NA
20
1
https://genomics.ed.ac.uk/services/training
 ELIXIR-UK
673 6559 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
12.07.2018
 13.07.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
33
2
https://training.csx.cam.ac.uk/bioinformatics/event/2480123
 ELIXIR-UK
674 6053 Metagenomics Bioinformatics
ELIXIR-DE
17.07.2018
 20.07.2018
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL Heidelberg, EMBL-EBI
Hinxton
United Kingdom
Academia/ Research Institution
NA
Marine Metagenomics
35
8
https://www.denbi.de/training-archive-sorted-according-by-date/2018/118-metageno...
 ELIXIR-DE
675 6268 Programming in Python for Biologists
ELIXIR-PT
23.07.2018
 27.07.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Instituto Gulbenkian de Ciência / BioData.pt
Oeiras
Portugal
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
18
3
http://gtpb.igc.gulbenkian.pt/bicourses/2018/PPB18/
 ELIXIR-PT
676 6054 Data Science for Life Science
ELIXIR-DE
23.07.2018
 25.07.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Konstanz
Konstanz
Germany
Academia/ Research Institution
NA
NA
10
2
https://www.denbi.de/training-archive-sorted-according-by-date/2018/119-data-sci...
 ELIXIR-DE
677 6560 Multiple biofluid and tissue types, from sample preparation to analysis strategies
ELIXIR-UK
23.07.2018
 25.07.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Birmingham Metabolomics Training Centre University of Birmingham
Birmingham
United Kingdom
Academia/ Research Institution
NA
NA
1
4
https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list...
 ELIXIR-UK
678 6055 Microbiome Analysis with QIIME2 - ISME17
ELIXIR-DE
15.08.2018
 15.08.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Bremen
Leipzig
Germany
Academia/ Research Institution
NA
Marine Metagenomics
30
1
https://www.denbi.de/training-archive-sorted-according-by-date/2018/120-microbio...
 ELIXIR-DE
679 6056 GTN collaboration fest on metagenomics (online)
ELIXIR-DE
17.08.2018
 17.08.2018
1.00 Days
Training - elearning
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Online
Online
Academia/ Research Institution
NA
Marine Metagenomics
20
2
https://www.denbi.de/training-archive-sorted-according-by-date/2018/121-gtn-coll...
 ELIXIR-DE
680 5772 Train the Trainer
ELIXIR-BE
20.08.2018
 21.08.2018
2.00 Days
Training - face to face
EXCELERATE
VIB Vlaams Instituut voor Biotechnologie
Antwerp
Belgium
WP11 - TtT
Academia/ Research Institution
NA
NA
11
2
https://www.eventbrite.com/e/elixir-excelerate-train-the-trainer-registration-45...
 ELIXIR-BE
681 5871 Advanced Statistics: Statistical Modeling
ELIXIR-CH
20.08.2018
 23.08.2018
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
25
3
https://www.sib.swiss/training/course/2018-08-advanced-stats
 ELIXIR-CH
682 6186 ELIXIR/CODATA-RDA Advanced Bioinformatics Workshop
ELIXIR-GR
ELIXIR-NL
20.08.2018
 24.08.2018
5.00 Days
Training - face to face
ELIXIR Node
CODATA-RDA, DTL, CERTH, H3ABioNet, GOBLET
Trieste
Italy
Academia/ Research Institution
NA
NA
24
3
http://codata-rda-advanced-bioinformatics-2018.readthedocs.io
 ELIXIR-GR
683 5771 NGS Analysis Summer School
ELIXIR-BE
ELIXIR-NL
26.08.2018
 31.08.2018
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
VIB, BioSB
Leuven
Belgium
Academia/ Research Institution
Non-Profit Organisation
NA
NA
42
3
https://wiki.bits.vib.be/index.php/NGS_data_analysis#Summer_school_2018
 ELIXIR-BE
684 6236 summer school
ELIXIR-NL
ELIXIR-BE
26.08.2018
 31.08.2018
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
VIB Vlaams Instituut voor Biotechnologie, BioSB
Leuven
Belgium
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
42
3
https://wiki.bits.vib.be/index.php/NGS_data_analysis#Summer_school_2018
 ELIXIR-NL
685 6292 Introduction to Bioinformatics usign NGS data
ELIXIR-SE
27.08.2018
 31.08.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS, SciLifeLab
Uppsala
Sweden
Academia/ Research Institution
NA
NA
25
10
https://www.scilifelab.se/education/courses/
 ELIXIR-SE
686 5875 Comparative Genomics
ELIXIR-CH
03.09.2018
 05.09.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB
Lausanne
Switzerland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
19
3
https://www.sib.swiss/training/course/2018-09-comparative-genomics
 ELIXIR-CH
687 6061 de.NBI Summer School 2018
ELIXIR-DE
03.09.2018
 07.09.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Jakobs University Bremen
Braunschweig
Germany
Academia/ Research Institution
NA
NA
18
15
https://www.denbi.de/training-archive-sorted-according-by-date/122-de-nbi-summer...
 ELIXIR-DE
688 6062 CIBI - KNIME Cluster Hackathon
ELIXIR-DE
03.09.2018
 07.09.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Konstanz
Konstanz
Germany
Academia/ Research Institution
NA
NA
9
2
https://www.denbi.de/training-archive-sorted-according-by-date/123-cibi-knime-cl...
 ELIXIR-DE
689 6561 Introduction to RNA-seq data analysis
ELIXIR-UK
03.09.2018
 05.09.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
47
5
https://training.csx.cam.ac.uk/bioinformatics/event/2605748
 ELIXIR-UK
690 5876 NGS bioinformatics quality control and variant annotation for cancer diagnosis
ELIXIR-CH
04.09.2018
 04.09.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB
Bern
Switzerland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
27
3
https://www.sib.swiss/training/course/2018-09-ngs-clinical-qc-annot
 ELIXIR-CH
691 6063 RNA-Seq data analysis with Galaxy for clinical applications - GMDS 2018
ELIXIR-DE
04.09.2018
 04.09.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Rostock
Osnabrück
Germany
Academia/ Research Institution
NA
Galaxy
5
2
https://www.denbi.de/training-archive-sorted-according-by-date/91-rna-seq-data-a...
 ELIXIR-DE
692 6064 Galaxy for Proteomics
ELIXIR-DE
05.09.2018
 05.09.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Freiburg
Germany
Academia/ Research Institution
NA
Galaxy
15
6
https://www.denbi.de/training-archive-sorted-according-by-date/124-galaxy-for-pr...
 ELIXIR-DE
693 6065 Introduction data analysis in Python
ELIXIR-DE
06.09.2018
 07.09.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
NA
20
6
https://www.denbi.de/training-archive-sorted-according-by-date/125-introduction-...
 ELIXIR-DE
694 6562 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
06.09.2018
 07.09.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
32
2
https://training.csx.cam.ac.uk/bioinformatics/event/2605767
 ELIXIR-UK
695 6066 Modern and scalable tools for efficient analysis of very large metagenomic datasets - ECCB2018
ELIXIR-DE
08.09.2018
 08.09.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CeBiTec
Athens
Greece
Academia/ Research Institution
NA
Marine Metagenomics
24
7
https://www.denbi.de/training-archive-sorted-according-by-date/133-modern-and-sc...
 ELIXIR-DE
696 6067 Computational Mass Spectrometry with OpenMS - From Algorithms to Integrated Workflows - ECCB 2018
ELIXIR-DE
08.09.2018
 08.09.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Tübingen
Athens
Greece
Academia/ Research Institution
NA
Proteomics
Metabolomics
4
3
https://www.denbi.de/training-archive-sorted-according-by-date/130-computational...
 ELIXIR-DE
697 6068 From an application to a fully integrated workflow – Comprehensive software engineering with SeqAn - ECCB 2018
ELIXIR-DE
09.09.2018
 09.09.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
FU Berlin
Athens
Greece
Academia/ Research Institution
NA
NA
4
2
https://www.denbi.de/training-archive-sorted-according-by-date/127-from-an-appli...
 ELIXIR-DE
698 6069 Galaxy workshop - ECCB 2018
ELIXIR-DE
10.09.2018
 10.09.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Athens
Greece
Academia/ Research Institution
NA
Galaxy
20
2
https://www.denbi.de/training-archive-sorted-according-by-date/126-galaxy-worksh...
 ELIXIR-DE
699 6293 Introduction to Bioinformatics using NGS data
ELIXIR-SE
10.09.2018
 14.09.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS
Uppsala
Sweden
Academia/ Research Institution
NA
NA
25
14
https://scilifelab.github.io/courses/ngsintro/1609/
 ELIXIR-SE
700 6563 Statistics for Biologists in R
ELIXIR-UK
10.09.2018
 11.09.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
38
1
https://training.csx.cam.ac.uk/bioinformatics/event/2601252
 ELIXIR-UK
CSV