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All ELIXIR events (Expanded)

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# Event code Title ELIXIR Node Start datesort ascending End date Duration Event type Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
701 7020 Introducing UTAP: User-friendly Transcriptome Analysis Pipeline
ELIXIR-IL
09.09.2019
 09.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Weizmann Institute of Science
Rehovot
Israel
Academia/ Research Institution
NA
NA
20
3
https://www.weizmann.ac.il/LS_CoreFacilities/bioinformatics-lscf/courses#uw44
 ELIXIR-IL
702 6790 RNA-Seq data analysis with Galaxy for clinical applications - GMDS 2019
ELIXIR-DE
08.09.2019
 08.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Rostock
Dortmund
Germany
Academia/ Research Institution
NA
NA
4
2
https://www.denbi.de/training-archive-sorted-according-by-date/662-rna-seq-data-...
 ELIXIR-DE
703 6874 Network Analysis of Higher Dimensional Biological Data
ELIXIR-UK
06.09.2019
 06.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
14
1
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
704 6844 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
05.09.2019
 06.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
43
2
https://training.cam.ac.uk/bioinformatics/event/3070466
 ELIXIR-UK
705 6789 2nd de.NBI Cloud User Meeting
ELIXIR-DE
03.09.2019
 05.09.2019
3.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
de.NBI
Heidelberg
Germany
Academia/ Research Institution
NA
NA
49
13
https://www.denbi.de/training-archive-sorted-according-by-date/622-2nd-de-nbi-cl...
 ELIXIR-DE
706 7005 Analysis of bulk RNA
ELIXIR-UK
02.09.2019
 04.09.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
45
4
https://training.cam.ac.uk/bioinformatics/event/3070967
 ELIXIR-UK
707 6788 de.NBI Summer School 2019 - (Bio)Data Science
ELIXIR-DE
02.09.2019
 06.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
IPK Gatersleben
Gatersleben
Germany
Academia/ Research Institution
NA
Plant Sciences
Proteomics
Metabolomics
17
10
https://www.denbi.de/training-archive-sorted-according-by-date/528-de-nbi-summer...
 ELIXIR-DE
708 6816 Analysis of bulk RNA-seq data
ELIXIR-UK
02.09.2019
 04.09.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
Industry
NA
NA
45
4
https://www.training.cam.ac.uk/bioinformatics/event/3070967
 ELIXIR-UK
709 6804 ELIXIR-EXCELERATE Train-the-trainer Course
ELIXIR-NL
29.08.2019
 30.08.2019
2.00 Days
Training - face to face
EXCELERATE
ELIXIR Node
ELIXIR Hub
DTL/ELIXIR-NL
Utrecht
Netherlands
WP11 - TtT
Academia/ Research Institution
NA
NA
14
2
https://www.eventbrite.co.uk/e/elixir-excelerate-train-the-trainer-event-tickets...
 ELIXIR-NL
710 6873 Metabarcoding and Metagenomics
ELIXIR-UK
28.08.2019
 30.08.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
5
3
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
711 6805 Getting started on the high-throughput data processing platform
ELIXIR-NL
28.08.2019
 28.08.2019
1.00 Days
Training - face to face
EXCELERATE
SURFsara
Utrecht
Netherlands
WP11 - TtR
WP11 - TtD
Academia/ Research Institution
Compute
NA
4
3
https://sara-nl.github.io/2019-08-28-htdp-elixir/
 ELIXIR-NL
712 6774 ELIXIR / CODATA-RDA Research Data Science Advanced Workshop on Bioinformatics
ELIXIR-GR
ELIXIR-NL
19.08.2019
 23.08.2019
5.00 Days
Training - face to face
ELIXIR Platform
CERTH, H3ABioNet, CODATA-RDA, DTL
Trieste
Italy
Academia/ Research Institution
NA
NA
19
3
https://codata-rda-advanced-bioinformatics-2019.readthedocs.io/en/latest/_downlo...
 ELIXIR-GR
713 6782 Advanced Statistics: Statistical Modeling
ELIXIR-CH
19.08.2019
 22.08.2019
4.00 Days
Training - face to face
ELIXIR Node
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
25
3
https://www.sib.swiss/training/course/2019-08-advanced-stats
 ELIXIR-CH
714 6787 Analyzing metabolic networks with CellNetAnalyzer - MPA
ELIXIR-DE
12.08.2019
 12.08.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
MPI Magdeburg
Riga
Latvia
Academia/ Research Institution
NA
NA
20
3
https://www.denbi.de/training-archive-sorted-according-by-date/630-analyzing-met...
 ELIXIR-DE
715 6872 Introduction to RNA-seq Data Analysis
ELIXIR-UK
05.08.2019
 09.08.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
25
3
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
716 6785 CSAMA 2019 - Statistical Data Analysis for Genome-Scale Biology
ELIXIR-DE
21.07.2019
 26.07.2019
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
de.NBI
Brixen
Italy
Academia/ Research Institution
NA
NA
72
14
https://www.denbi.de/training-archive-sorted-according-by-date/483-statistical-d...
 ELIXIR-DE
717 6786 Tools for reproducible research - ISMB/ECCB 2019
ELIXIR-DE
21.07.2019
 21.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Freiburg University
Basel
Switzerland
Academia/ Research Institution
NA
Galaxy
30
3
https://www.denbi.de/training-archive-sorted-according-by-date/652-tools-for-rep...
 ELIXIR-DE
718 6654 4 Simple recommendations for Open Source Software
ELIXIR-GR
ELIXIR-IT
ELIXIR-NL
17.07.2019
 19.07.2019
3.00 Days
Training - face to face
ELIXIR Node
ELIXIR Hub
Center for Research and Technology Hellas, Athena Research Center
Athens
Greece
Academia/ Research Institution
NA
NA
11
3
https://fpsom.github.io/2019-07-15-ttt-ELIXIR-Athens/
 ELIXIR-GR
719 6784 An Introduction to ChIP-seq Data Analysis
ELIXIR-DE
16.07.2019
 16.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
UKE Hamburg
Hamburg
Germany
Academia/ Research Institution
NA
NA
4
2
https://www.denbi.de/training-archive-sorted-according-by-date/594-an-introducti...
 ELIXIR-DE
720 6871 Network Analysis of High Dimensional Biological Data
ELIXIR-UK
15.07.2019
 15.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
20
1
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
721 6653 Carpentry Instructor Training
ELIXIR-GR
ELIXIR-IT
ELIXIR-NL
15.07.2019
 17.07.2019
3.00 Days
Training - face to face
ELIXIR Node
ELIXIR Hub
Center for Research and Technology Hellas, Athena Research Center
Athens
Greece
Academia/ Research Institution
NA
NA
13
3
https://fpsom.github.io/2019-07-15-ttt-ELIXIR-Athens/
 ELIXIR-GR
722 6754 Statistical Analysis using R
ELIXIR-UK
12.07.2019
 12.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
35
1
https://training.csx.cam.ac.uk/bioinformatics/event/2897618
 ELIXIR-UK
723 6870 Introduction to Python for Biologists
ELIXIR-UK
08.07.2019
 12.07.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
8
1
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
724 6678 Image Processing for Electron Microscopy and hybrid modelling
ELIXIR-ES
08.07.2019
 11.07.2019
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
National Center for Biotechnology (CNB)
Madrid
Spain
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
20
4
http://i2pc.es/instruct-course-on-image-processing-for-electron-microscopy-and-h...
 ELIXIR-ES
725 6753 Variant Discovery with GATK
ELIXIR-UK
08.07.2019
 11.07.2019
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
38
4
https://training.csx.cam.ac.uk/bioinformatics/event/2858057
 ELIXIR-UK
726 6648 Software Carpentry Workshop
ELIXIR-IT
03.07.2019
 05.07.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CNR
Napoli
Italy
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
25
4
https://elixir-iib-training.github.io/website/2019/07/05/SWC-Napoli.html
 ELIXIR-IT
727 6672 ELIXIR-SIB Data Carpentry with R
ELIXIR-CH
01.07.2019
 02.07.2019
2.00 Days
Training - face to face
EXCELERATE
ELIXIR Node
SIB
Zurich
Switzerland
WP11 - TtR
WP11
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
4
https://www.sib.swiss/training/course/2019-07-elixir-sib-dc
 ELIXIR-CH
728 6752 Summer School - Bioinformatics for Biologists: An introduction to Data Exploration, Statistics and Reproducibility
ELIXIR-UK
01.07.2019
 05.07.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
48
10
https://training.csx.cam.ac.uk/bioinformatics/event/2853417
 ELIXIR-UK
729 6963 Genome Assembly and Annotation Course 5
ELIXIR-FR
ELIXIR-IT
ELIXIR-SE
ELIXIR-SI
01.07.2019
 05.07.2019
5.00 Days
Training - face to face
EXCELERATE
University of Milano-Bicocca
Milan
Italy
WP11 - eLearning
WP10
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
6
https://elixir.mf.uni-lj.si/course/view.php?id=45
 ELIXIR-SI
730 6735 An introduction to metabolomics and its application in life-sciences
ELIXIR-UK
27.06.2019
 28.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
36
3
https://training.csx.cam.ac.uk/bioinformatics/event/2871453
 ELIXIR-UK
731 6706 Image Processing & Analysis with ilastik
ELIXIR-DE
27.06.2019
 27.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBl Heidelberg
Heidelberg
Germany
Academia/ Research Institution
NA
NA
19
1
https://www.denbi.de/training-archive-sorted-according-by-date/633-image-process...
 ELIXIR-DE
732 6749 Research data management and stewardship
ELIXIR-LU
25.06.2019
 26.06.2019
2.00 Days
Training - face to face
ELIXIR Implementation Study
Elixir-Luxembourg
Belval
Luxembourg
Academia/ Research Institution
NA
NA
20
5
https://elixir-luxembourg.org/research-data-management-and-stewardship
 ELIXIR-LU
733 6734 Image Analysis for Biologists
ELIXIR-UK
24.06.2019
 26.06.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
42
3
https://training.csx.cam.ac.uk/bioinformatics/event/2871473
 ELIXIR-UK
734 6712 Statistics in Omics
ELIXIR-NL
24.06.2019
 28.06.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
BioSB
Amsterdam
Netherlands
Academia/ Research Institution
NA
NA
30
5
https://www.biosb.nl/archive-courses/course-statistics-in-omics/
 ELIXIR-NL
735 6705 dais Learnathon 2019
ELIXIR-DE
23.06.2019
 29.06.2019
7.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
CSBD Dresden
Dresden
Germany
Academia/ Research Institution
NA
NA
12
10
https://www.denbi.de/training-archive-sorted-according-by-date/599-dais-learnath...
 ELIXIR-DE
736 6704 Metabolomics Data Clinic June 2019
ELIXIR-DE
21.06.2019
 21.06.2019
1.00 Days
Training - elearning
Non-ELIXIR/ Non-EXCELERATE funds
IPB Halle
Online
Online
Academia/ Research Institution
NA
Metabolomics
0
3
https://www.denbi.de/training-archive-sorted-according-by-date/631-metabolomics-...
 ELIXIR-DE
737 6733 Protein Structure Analysis
ELIXIR-UK
20.06.2019
 21.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
16
5
https://training.csx.cam.ac.uk/bioinformatics/event/2884552
 ELIXIR-UK
738 6731 Biological data analysis using InterMine (User Interface)
ELIXIR-UK
19.06.2019
 19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
8
1
https://training.csx.cam.ac.uk/bioinformatics/event/2874533
 ELIXIR-UK
739 6732 Biological data analysis using the InterMine API
ELIXIR-UK
19.06.2019
 19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
11
2
https://training.csx.cam.ac.uk/bioinformatics/event/2876900
 ELIXIR-UK
740 6671 Introduction to high-performance computing (sciCORE cluster)
ELIXIR-CH
19.06.2019
 19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB
Basel
Switzerland
WP11
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
1
https://www.sib.swiss/training/course/sciCORE-LinuxHPC-Jun2019
 ELIXIR-CH
741 6730 An Introduction to MATLAB for biologists
ELIXIR-UK
17.06.2019
 18.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
26
3
https://training.csx.cam.ac.uk/bioinformatics/event/2848057
 ELIXIR-UK
742 6703 Applied Metaproteomics Workshop 2019
ELIXIR-DE
17.06.2019
 21.07.2019
35.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Magdeburg
Magdeburg
Germany
Academia/ Research Institution
NA
Proteomics
9
4
https://www.denbi.de/training-archive-sorted-according-by-date/576-applied-metap...
 ELIXIR-DE
743 6912 ELIXIR AAI Training for Relying Services
ELIXIR-CZ
ELIXIR-FI
17.06.2019
 17.06.2019
1.00 Days
Knowledge exchange workshop
EXCELERATE
Masaryk University
Lisbon
Portugal
WP4
Academia/ Research Institution
Compute
NA
22
2
https://docs.google.com/document/d/1LGL1Ax_iRcw5A15kgr_epZobsDExDmCqu6keGBY22Dg/...
 ELIXIR-UK
744 6729 Data Science in Python
ELIXIR-UK
13.06.2019
 14.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
35
3
https://training.csx.cam.ac.uk/bioinformatics/event/2823193
 ELIXIR-UK
745 6702 The Linux Command Line: From Basic Commands to Shell Scripting
ELIXIR-DE
13.06.2019
 13.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
UKE Hamburg
Hamburg
Germany
Academia/ Research Institution
NA
NA
9
3
https://www.denbi.de/training-archive-sorted-according-by-date/593-the-linux-com...
 ELIXIR-DE
746 6670 NGS - Quality control, Alignment, Visualisation
ELIXIR-CH
12.06.2019
 14.06.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB
Bern
Switzerland
WP11
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
22
1
https://www.sib.swiss/training/course/2019-06-NGS6
 ELIXIR-CH
747 6711 Data Steward Knowledge and Skills Workshop
ELIXIR-NL
12.06.2019
 12.06.2019
1.00 Days
Knowledge exchange workshop
Non-ELIXIR/ Non-EXCELERATE funds
DTL
Utrecht
Netherlands
Academia/ Research Institution
NA
NA
33
3
https://www.dtls.nl/events/data-steward-knowledge-and-skills-workshop-2/
 ELIXIR-NL
748 6728 An Introduction to Solving Biological Problems with R
ELIXIR-UK
11.06.2019
 12.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
27
2
https://training.csx.cam.ac.uk/bioinformatics/event/2823243
 ELIXIR-UK
749 6996 An Introduction to Solving Biological Problems with R
ELIXIR-UK
11.06.2019
 12.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
27
2
https://training.cam.ac.uk/bioinformatics/event/2823243
 ELIXIR-UK
750 6701 RNA-seq workshop for beginners: from sequences to visualization using Galaxy
ELIXIR-DE
ELIXIR-NL
11.06.2019
 12.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Freiburg
Germany
Academia/ Research Institution
NA
Galaxy
40
2
https://www.denbi.de/training-archive-sorted-according-by-date/628-rna-seq-works...
 ELIXIR-DE
CSV