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All ELIXIR events (Expanded)

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# Event code Title ELIXIR Node Start date End datesort descending Duration Event type Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
1001 6753 Variant Discovery with GATK
ELIXIR-UK
08.07.2019
 11.07.2019
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
38
4
https://training.csx.cam.ac.uk/bioinformatics/event/2858057
 ELIXIR-UK
1002 6870 Introduction to Python for Biologists
ELIXIR-UK
08.07.2019
 12.07.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
8
1
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1003 6754 Statistical Analysis using R
ELIXIR-UK
12.07.2019
 12.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
35
1
https://training.csx.cam.ac.uk/bioinformatics/event/2897618
 ELIXIR-UK
1004 6653 Carpentry Instructor Training
ELIXIR-GR
ELIXIR-IT
ELIXIR-NL
15.07.2019
 17.07.2019
3.00 Days
Training - face to face
ELIXIR Node
ELIXIR Hub
Center for Research and Technology Hellas, Athena Research Center
Athens
Greece
Academia/ Research Institution
NA
NA
13
3
https://fpsom.github.io/2019-07-15-ttt-ELIXIR-Athens/
 ELIXIR-GR
1005 6871 Network Analysis of High Dimensional Biological Data
ELIXIR-UK
15.07.2019
 15.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
20
1
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1006 6784 An Introduction to ChIP-seq Data Analysis
ELIXIR-DE
16.07.2019
 16.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
UKE Hamburg
Hamburg
Germany
Academia/ Research Institution
NA
NA
4
2
https://www.denbi.de/training-archive-sorted-according-by-date/594-an-introducti...
 ELIXIR-DE
1007 6654 4 Simple recommendations for Open Source Software
ELIXIR-GR
ELIXIR-IT
ELIXIR-NL
17.07.2019
 19.07.2019
3.00 Days
Training - face to face
ELIXIR Node
ELIXIR Hub
Center for Research and Technology Hellas, Athena Research Center
Athens
Greece
Academia/ Research Institution
NA
NA
11
3
https://fpsom.github.io/2019-07-15-ttt-ELIXIR-Athens/
 ELIXIR-GR
1008 6785 CSAMA 2019 - Statistical Data Analysis for Genome-Scale Biology
ELIXIR-DE
21.07.2019
 26.07.2019
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
de.NBI
Brixen
Italy
Academia/ Research Institution
NA
NA
72
14
https://www.denbi.de/training-archive-sorted-according-by-date/483-statistical-d...
 ELIXIR-DE
1009 6786 Tools for reproducible research - ISMB/ECCB 2019
ELIXIR-DE
21.07.2019
 21.07.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Freiburg University
Basel
Switzerland
Academia/ Research Institution
NA
Galaxy
30
3
https://www.denbi.de/training-archive-sorted-according-by-date/652-tools-for-rep...
 ELIXIR-DE
1010 6872 Introduction to RNA-seq Data Analysis
ELIXIR-UK
05.08.2019
 09.08.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
25
3
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1011 6787 Analyzing metabolic networks with CellNetAnalyzer - MPA
ELIXIR-DE
12.08.2019
 12.08.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
MPI Magdeburg
Riga
Latvia
Academia/ Research Institution
NA
NA
20
3
https://www.denbi.de/training-archive-sorted-according-by-date/630-analyzing-met...
 ELIXIR-DE
1012 6774 ELIXIR / CODATA-RDA Research Data Science Advanced Workshop on Bioinformatics
ELIXIR-GR
ELIXIR-NL
19.08.2019
 23.08.2019
5.00 Days
Training - face to face
ELIXIR Platform
CERTH, H3ABioNet, CODATA-RDA, DTL
Trieste
Italy
Academia/ Research Institution
NA
NA
19
3
https://codata-rda-advanced-bioinformatics-2019.readthedocs.io/en/latest/_downlo...
 ELIXIR-GR
1013 6782 Advanced Statistics: Statistical Modeling
ELIXIR-CH
19.08.2019
 22.08.2019
4.00 Days
Training - face to face
ELIXIR Node
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
25
3
https://www.sib.swiss/training/course/2019-08-advanced-stats
 ELIXIR-CH
1014 6805 Getting started on the high-throughput data processing platform
ELIXIR-NL
28.08.2019
 28.08.2019
1.00 Days
Training - face to face
EXCELERATE
SURFsara
Utrecht
Netherlands
WP11 - TtR
WP11 - TtD
Academia/ Research Institution
Compute
NA
4
3
https://sara-nl.github.io/2019-08-28-htdp-elixir/
 ELIXIR-NL
1015 6873 Metabarcoding and Metagenomics
ELIXIR-UK
28.08.2019
 30.08.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
5
3
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1016 6804 ELIXIR-EXCELERATE Train-the-trainer Course
ELIXIR-NL
29.08.2019
 30.08.2019
2.00 Days
Training - face to face
EXCELERATE
ELIXIR Node
ELIXIR Hub
DTL/ELIXIR-NL
Utrecht
Netherlands
WP11 - TtT
Academia/ Research Institution
NA
NA
14
2
https://www.eventbrite.co.uk/e/elixir-excelerate-train-the-trainer-event-tickets...
 ELIXIR-NL
1017 6788 de.NBI Summer School 2019 - (Bio)Data Science
ELIXIR-DE
02.09.2019
 06.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
IPK Gatersleben
Gatersleben
Germany
Academia/ Research Institution
NA
Plant Sciences
Proteomics
Metabolomics
17
10
https://www.denbi.de/training-archive-sorted-according-by-date/528-de-nbi-summer...
 ELIXIR-DE
1018 6816 Analysis of bulk RNA-seq data
ELIXIR-UK
02.09.2019
 04.09.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
Industry
NA
NA
45
4
https://www.training.cam.ac.uk/bioinformatics/event/3070967
 ELIXIR-UK
1019 7005 Analysis of bulk RNA
ELIXIR-UK
02.09.2019
 04.09.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
45
4
https://training.cam.ac.uk/bioinformatics/event/3070967
 ELIXIR-UK
1020 6789 2nd de.NBI Cloud User Meeting
ELIXIR-DE
03.09.2019
 05.09.2019
3.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
de.NBI
Heidelberg
Germany
Academia/ Research Institution
NA
NA
49
13
https://www.denbi.de/training-archive-sorted-according-by-date/622-2nd-de-nbi-cl...
 ELIXIR-DE
1021 6844 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
05.09.2019
 06.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
43
2
https://training.cam.ac.uk/bioinformatics/event/3070466
 ELIXIR-UK
1022 6874 Network Analysis of Higher Dimensional Biological Data
ELIXIR-UK
06.09.2019
 06.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
14
1
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1023 6790 RNA-Seq data analysis with Galaxy for clinical applications - GMDS 2019
ELIXIR-DE
08.09.2019
 08.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Rostock
Dortmund
Germany
Academia/ Research Institution
NA
NA
4
2
https://www.denbi.de/training-archive-sorted-according-by-date/662-rna-seq-data-...
 ELIXIR-DE
1024 6775 Introduction to Machine Learning: Opportunities for advancing omics data analysis
ELIXIR-CH
ELIXIR-GR
09.09.2019
 09.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
INAB-CERTH, H3ABioNet
Basel
Switzerland
Academia/ Research Institution
Industry
Healthcare
NA
NA
29
2
https://fpsom.github.io/IntroToMachineLearning/
 ELIXIR-GR
1025 6781 Clinical bioinformatics for microbial genomics and metagenomics - ESCMID, CHUV, SIB
ELIXIR-CH
09.09.2019
 12.09.2019
4.00 Days
Training - face to face
ELIXIR Node
SIB Swiss Institute of Bioinformatics, CHUV, ESCMID
Lausanne
Switzerland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
52
14
https://www.sib.swiss/training/course/2019-09-metagenomics
 ELIXIR-CH
1026 6783 Computational PANGenomics
ELIXIR-PT
09.09.2019
 13.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Instituto Gulbenkian de Ciência
Oeiras
Portugal
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
19
2
http://gtpb.igc.gulbenkian.pt/bicourses/2019/CPANG19/index.html
 ELIXIR-PT
1027 6791 Dresden Deep Learning Hackathon
ELIXIR-DE
09.09.2019
 13.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CSBD Dresden
Dresden
Germany
Academia/ Research Institution
NA
NA
35
2
https://www.denbi.de/training-archive-sorted-according-by-date/636-dresden-deep-...
 ELIXIR-DE
1028 6845 Introduction to R for Biologists
ELIXIR-UK
09.09.2019
 10.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
42
3
https://training.cam.ac.uk/bioinformatics/event/3070999
 ELIXIR-UK
1029 6930 Omics Integration and Systems Biology
ELIXIR-SE
09.09.2019
 12.09.2019
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS
Stockholm
Sweden
Academia/ Research Institution
NA
NA
23
8
https://www.scilifelab.se/events/omics-integration-and-systems-biology/
 ELIXIR-SE
1030 7020 Introducing UTAP: User-friendly Transcriptome Analysis Pipeline
ELIXIR-IL
09.09.2019
 09.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Weizmann Institute of Science
Rehovot
Israel
Academia/ Research Institution
NA
NA
20
3
https://www.weizmann.ac.il/LS_CoreFacilities/bioinformatics-lscf/courses#uw44
 ELIXIR-IL
1031 6875 Bioinformatics for Genomics
ELIXIR-UK
09.09.2019
 13.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Edinburgh/Edinburgh Genomics
Edinburgh
United Kingdom
Academia/ Research Institution
Industry
Healthcare
NA
NA
16
4
http://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1032 6776 Bioinformatics tools to predict protein properties from sequence
ELIXIR-BE
10.09.2019
 10.09.2019
1.00 Days
Training - face to face
ELIXIR Node
VIB
Brussels
Belgium
Academia/ Research Institution
NA
NA
14
2
https://tess.elixir-europe.org/events/bioinformatics-tools-to-predict-protein-pr...
 ELIXIR-BE
1033 6956 Statistical tests and statistical learning for omics data
ELIXIR-LU
11.09.2019
 12.09.2019
2.00 Days
Training - face to face
ELIXIR Node
University of Luxembourg
Esch-sur-Alzette
Luxembourg
Academia/ Research Institution
NA
NA
24
4
https://elixir-luxembourg.org/events/2019_09_11_statistical_tests
 ELIXIR-LU
1034 6792 Galaxy Training Network day: (online) CoFest and community call
ELIXIR-DE
12.09.2019
 12.09.2019
1.00 Days
Knowledge exchange workshop
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Online
Online
Academia/ Research Institution
NA
Galaxy
15
1
https://www.denbi.de/training-archive-sorted-according-by-date/667-galaxy-traini...
 ELIXIR-DE
1035 6793 Combining Workflows, Tools and Data Management - GCB 2019
ELIXIR-DE
16.09.2019
 16.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
HITS Heidelberg
Heidelberg
Germany
Academia/ Research Institution
NA
Galaxy
15
3
https://www.denbi.de/training-archive-sorted-according-by-date/595-combining-wor...
 ELIXIR-DE
1036 6794 MOFA Workshop - GCB 2019
ELIXIR-DE
16.09.2019
 16.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
DKFZ Heidelberg
Heidelberg
Germany
Academia/ Research Institution
NA
NA
30
1
https://www.denbi.de/training-archive-sorted-according-by-date/684-mofa-workshop...
 ELIXIR-DE
1037 6795 Getting started with the de.NBI Cloud - GCB 2019
ELIXIR-DE
16.09.2019
 16.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CeBiTec
Heidelberg
Germany
Academia/ Research Institution
NA
NA
20
6
https://www.denbi.de/training-archive-sorted-according-by-date/565-introduction-...
 ELIXIR-DE
1038 6796 Integrating computational meta-omics for microbiome research - GCB 2019
ELIXIR-DE
16.09.2019
 16.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Magdeburg
Heidelberg
Germany
Academia/ Research Institution
NA
Proteomics
30
3
https://www.denbi.de/training-archive-sorted-according-by-date/654-integrating-c...
 ELIXIR-DE
1039 6797 Proteomics and metabolomics with OpenMS and pyOpenMS - GCB2019
ELIXIR-DE
16.09.2019
 16.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Tübingen
Heidelberg
Germany
Academia/ Research Institution
NA
Proteomics
Metabolomics
10
2
https://www.denbi.de/training-archive-sorted-according-by-date/666-proteomics-an...
 ELIXIR-DE
1040 6846 Bioinformatics for Principal Investigators
ELIXIR-UK
16.09.2019
 17.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
27
6
https://training.cam.ac.uk/bioinformatics/event/3070941
 ELIXIR-UK
1041 7416 General GDPR introduction to life scientists
ELIXIR-EE
16.09.2019
 16.09.2019
1.00 Days
Training - face to face
ELIXIR Node
University of Tartu, Estonian Scientific Computing Infrastructure
Tartu
Estonia
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
74
1
https://elixir.ut.ee/node/262
 ELIXIR-EE
1042 6919 Bioinformatics for Principal Investigators
ELIXIR-SE
17.09.2019
 18.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS
Stockholm
Sweden
Academia/ Research Institution
NA
NA
13
8
https://www.scilifelab.se/events/bioinformatics-for-principal-investigators/
 ELIXIR-SE
1043 6798 Introduction to genome-wide association studies (GWAS) 2019
ELIXIR-DE
18.09.2019
 18.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Kiel
Kiel
Germany
Academia/ Research Institution
NA
NA
11
2
https://www.denbi.de/training-archive-sorted-according-by-date/611-introduction-...
 ELIXIR-DE
1044 6799 KNIME Hackathon 2019
ELIXIR-DE
18.09.2019
 25.09.2019
8.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
University of Konstanz
Konstanz
Germany
Academia/ Research Institution
NA
NA
13
2
https://www.denbi.de/training-archive-sorted-according-by-date/539-knime-hackath...
 ELIXIR-DE
1045 6800 Microscopy Image Analysis Course 2019
ELIXIR-DE
19.09.2019
 20.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Heidelberg University
Heidelberg
Germany
Academia/ Research Institution
NA
NA
20
5
https://www.denbi.de/training-archive-sorted-according-by-date/73-microscopy-ima...
 ELIXIR-DE
1046 6801 Eukaryote genome annotation workshop 2019
ELIXIR-DE
19.09.2019
 19.09.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Kiel
Kiel
Germany
Academia/ Research Institution
NA
NA
15
2
https://www.denbi.de/training-archive-sorted-according-by-date/610-eukaryote-gen...
 ELIXIR-DE
1047 6847 Statistics for Biologists in R
ELIXIR-UK
19.09.2019
 20.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
1
https://training.cam.ac.uk/bioinformatics/event/2815748
 ELIXIR-UK
1048 6649 International Summer School on Rare Disease Registries and FAIRification of Data
ELIXIR-IT
ELIXIR-NL
23.09.2019
 27.09.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Istituto Superiore di Sanità (ISS)
Roma
Italy
Academia/ Research Institution
Non-Profit Organisation
Healthcare
NA
Rare Diseases
30
23
http://www.ejprarediseases.org/index.php/international-summer-school-on-rare-dis...
 ELIXIR-IT
1049 6780 Introduction to RNA-Seq: From quality control to pathway analysis
ELIXIR-CH
23.09.2019
 24.09.2019
2.00 Days
Training - face to face
ELIXIR Node
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
24
1
https://www.sib.swiss/training/course/2019-09-rnas-be03
 ELIXIR-CH
1050 6802 Protein Structure Fundamentals: Searching – Analyzing – Modeling
ELIXIR-DE
23.09.2019
 24.09.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Hamburg
Hamburg
Germany
Academia/ Research Institution
NA
NA
22
4
https://www.denbi.de/training-archive-sorted-according-by-date/606-protein-struc...
 ELIXIR-DE
CSV