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All ELIXIR events (Expanded)

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# Event code Title ELIXIR Node Start date End datesort ascending Duration Event type Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
1051 6053 Metagenomics Bioinformatics
ELIXIR-DE
17.07.2018
 20.07.2018
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL Heidelberg, EMBL-EBI
Hinxton
United Kingdom
Academia/ Research Institution
NA
Marine Metagenomics
35
8
https://www.denbi.de/training-archive-sorted-according-by-date/2018/118-metageno...
 ELIXIR-DE
1052 6559 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
12.07.2018
 13.07.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
33
2
https://training.csx.cam.ac.uk/bioinformatics/event/2480123
 ELIXIR-UK
1053 6558 Advanced Python for Biologists
ELIXIR-UK
09.07.2018
 13.07.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Edingburgh Genomics University of Edingburgh
Edingburgh
United Kingdom
Academia/ Research Institution
NA
NA
20
1
https://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1054 6557 Image Analysis for Biologists
ELIXIR-UK
09.07.2018
 11.07.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
3
https://training.csx.cam.ac.uk/bioinformatics/event/2495657
 ELIXIR-UK
1055 6052 CSAMA 2018
ELIXIR-DE
08.07.2018
 13.07.2018
6.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Bressanone-Brixen
Italy
Academia/ Research Institution
NA
NA
73
10
https://www.denbi.de/training-archive-sorted-according-by-date/2018/117-csama-20...
 ELIXIR-DE
1056 6556 R object-oriented programming and package development
ELIXIR-UK
06.07.2018
 06.07.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
31
2
https://training.csx.cam.ac.uk/bioinformatics/event/2480552
 ELIXIR-UK
1057 6555 Working with Python: functions and modules
ELIXIR-UK
04.07.2018
 04.07.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
30
2
https://training.csx.cam.ac.uk/bioinformatics/event/2481914
 ELIXIR-UK
1058 6051 How to Share FAIR — The FAIRDOM Data and Model Management Practice – SBMC 2018
ELIXIR-DE
04.07.2018
 04.07.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
HITS
Bremen
Germany
Academia/ Research Institution
NA
NA
5
2
https://www.denbi.de/training-archive-sorted-according-by-date/2018/115-how-to-s...
 ELIXIR-DE
1059 6554 An introduction to metabolomics and its application in life-sciences
ELIXIR-UK
02.07.2018
 03.07.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
34
3
https://training.csx.cam.ac.uk/bioinformatics/event/2463063
 ELIXIR-UK
1060 6553 Data Carpentry in R
ELIXIR-UK
28.06.2018
 29.06.2018
2.00 Days
Training - face to face
ELIXIR Node
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
39
4
https://training.csx.cam.ac.uk/bioinformatics/event/2463814
 ELIXIR-UK
1061 6552 Analysis of DNA Methylation using Sequencing
ELIXIR-UK
27.06.2018
 27.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
32
2
https://training.csx.cam.ac.uk/bioinformatics/event/2426618
 ELIXIR-UK
1062 6050 A primer for RNA-Seq processing, interpreting and visualization
ELIXIR-DE
27.06.2018
 29.06.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Rostock
Jena
Germany
Academia/ Research Institution
NA
Galaxy
13
3
https://www.denbi.de/training-archive-sorted-according-by-date/2018/114-a-primer...
 ELIXIR-DE
1063 5870 Single cell transcriptome workshop
ELIXIR-CH
27.06.2018
 28.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
33
1
https://www.sib.swiss/training/course/2018-06-single-cell-transcriptome
 ELIXIR-CH
1064 6049 Introduction to Linux Command Line & Basic Scripting
ELIXIR-DE
26.06.2018
 27.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
NA
18
3
https://www.denbi.de/training-archive-sorted-according-by-date/2018/82-introduct...
 ELIXIR-DE
1065 5769 Introduction to Galaxy
ELIXIR-BE
26.06.2018
 26.06.2018
1.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
VIB
Ghent
Belgium
Academia/ Research Institution
Non-Profit Organisation
NA
NA
7
1
https://hackmd-ce.herokuapp.com/p/Skq-YwqWQ
 ELIXIR-BE
1066 6551 An Introduction to MATLAB for biologists
ELIXIR-UK
25.06.2018
 26.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
28
3
https://training.csx.cam.ac.uk/bioinformatics/event/2505664
 ELIXIR-UK
1067 6232 WAAS: Course Data management and computational workflows
ELIXIR-NL
25.06.2018
 25.06.2018
1.00 Days
Training - face to face
ELIXIR Implementation Study
ELIXIR Node
SURFsara
Amsterdam
Netherlands
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
20
https://www.surf.nl/en/agenda/2018/06/course-data-management-and-computational-w...
 ELIXIR-NL
1068 6208 BITS 2018 Tutorial on Docker and Reproducibility
ELIXIR-IT
25.06.2018
 26.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CNR, BITS
Torino
Italy
Academia/ Research Institution
NA
NA
14
3
https://elixir-iib-training.github.io/website/2018/06/25/BITS_Docker_Torino.html
 ELIXIR-IT
1069 6172 Bioinformatic and Biostatistic tools in medical genomics (Summer school)
ELIXIR-FR
25.06.2018
 29.06.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB), Genopole
Paris
France
Academia/ Research Institution
NA
NA
20
10
https://www.genopole.fr/spip.php?page=rubrique_event&id_rubrique=1160&event=1108...
 ELIXIR-FR
1070 5869 De novo RNA-Seq assembly workshop
ELIXIR-CH
25.06.2018
 26.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
18
1
https://biologie.cuso.ch/index.php?id=1741&L=0&tx_displaycontroller%5BshowUid%5D...
 ELIXIR-CH
1071 6231 BioSB Algorithms in Biological Networks
ELIXIR-NL
25.06.2018
 29.06.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
BioSB
Wageningen
Netherlands
Academia/ Research Institution
NA
NA
13
6
https://www.biosb.nl/archive-courses/algorithms-for-biological-networks-2018/
 ELIXIR-NL
1072 6134 A tutorial of hipathia, a mechanistic model of pathway activity
ELIXIR-ES
22.06.2018
 23.06.2018
2.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
Institut Curie, Fundación Progreso y Salud (FPS)
Paris
France
Academia/ Research Institution
NA
NA
20
3
http://courseswiki.clinbioinfosspa.es/dmcm2018/start#a_tutorial_of_hipathia_a_me...
 ELIXIR-ES
1073 6550 Statistics for Biologists in R
ELIXIR-UK
21.06.2018
 22.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
1
https://training.csx.cam.ac.uk/bioinformatics/event/2534302
 ELIXIR-UK
1074 5868 Long reads applied to plant genome assembling
ELIXIR-CH
20.06.2018
 21.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
NA
NA
18
5
https://www.sib.swiss/training/course/2018-06-Long-Reads
 ELIXIR-CH
1075 6549 Introduction to RNA-seq data analysis
ELIXIR-UK
18.06.2018
 20.06.2018
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
38
5
https://training.csx.cam.ac.uk/bioinformatics/event/2505682
 ELIXIR-UK
1076 5867 High Performance Computing (HPC) in Life Sciences: Vital-IT Infrastructure Training
ELIXIR-CH
15.06.2018
 15.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
12
3
https://www.sib.swiss/training/course/2018-06-hpc-training
 ELIXIR-CH
1077 5768 Protein Structure Analysis - part of Implentation Study WaaS
ELIXIR-BE
15.06.2018
 15.06.2018
1.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
VIB Vlaams Instituut voor Biotechnologie
Ghent
Belgium
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
Compute
NA
4
1
https://wiki.bits.vib.be/index.php/Protein_Structure_Analysis_training
 ELIXIR-BE
1078 6548 An Introduction to Solving Biological Problems with R
ELIXIR-UK
14.06.2018
 15.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
44
3
https://training.csx.cam.ac.uk/bioinformatics/event/2469414
 ELIXIR-UK
1079 6547 Introduction to Scientific Figure Design
ELIXIR-UK
13.06.2018
 13.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
39
2
https://training.csx.cam.ac.uk/bioinformatics/event/2426612
 ELIXIR-UK
1080 6048 FAIR Data Management for Plant Genomics & Phenomics: Standards, Tools and Infrastructures
ELIXIR-DE
13.06.2018
 13.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
IPK Gatersleben
Harpenden
United Kingdom
Academia/ Research Institution
NA
Plant Sciences
28
2
https://www.denbi.de/training-archive-sorted-according-by-date/2018/112-fair-dat...
 ELIXIR-DE
1081 5866 Docker for reproducible computational research
ELIXIR-CH
13.06.2018
 13.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
21
1
https://www.sib.swiss/training/course/2018-06-docker
 ELIXIR-CH
1082 6546 Open Targets: Integrating genetics and genomics for disease biology and translational medicine
ELIXIR-UK
12.06.2018
 12.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
36
2
https://training.csx.cam.ac.uk/bioinformatics/event/2487585
 ELIXIR-UK
1083 6047 Machine Learning in R / mlR Workshop
ELIXIR-DE
12.06.2018
 13.06.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
NA
50
4
https://www.denbi.de/training-archive-sorted-according-by-date/2018/111-machine-...
 ELIXIR-DE
1084 5767 Data Carpentry (ecology lesson)
ELIXIR-BE
12.06.2018
 13.06.2018
2.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
VIB
Brussels
Belgium
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
18
4
http://www.datacarpentry.org/lessons/#ecology-workshop
 ELIXIR-BE
1085 6545 Introduction to Python for Biologists
ELIXIR-UK
11.06.2018
 15.06.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Edingburgh Genomics University of Edingburgh
Edingburgh
United Kingdom
Academia/ Research Institution
NA
NA
15
1
https://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1086 6290 Advanced Python
ELIXIR-SE
11.06.2018
 15.06.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS
Stockholm
Sweden
Academia/ Research Institution
NA
NA
20
1
https://www.scilifelab.se/events/quick-and-clean-advanced-python-for-data-scienc...
 ELIXIR-SE
1087 6291 R summer school
ELIXIR-SE
11.06.2018
 20.06.2018
10.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS, SciLifeLab
Visby
Sweden
Academia/ Research Institution
NA
NA
45
2
https://www.scilifelab.se/education/courses/
 ELIXIR-SE
1088 6628 Workshop "How to make training FAIR"
ELIXIR-UK
ELIXIR-NL
ELIXIR-CH
07.06.2018
 07.06.2018
1.00 Days
Knowledge exchange workshop
EXCELERATE
University of Cambridge, DTL, SIB
Berlin
Germany
WP11
Academia/ Research Institution
NA
NA
29
3
https://docs.google.com/document/d/1wrKUyD_GSq1HakpaOpU8u7KOReBk4S6BpYFDBziaBN0/...
 ELIXIR-UK
1089 5872 Beacon - AHM 2018 workshop
ELIXIR-CH
ELIXIR-ES
ELIXIR-FI
ELIXIR-LU
ELIXIR-SI
07.06.2018
 07.06.2018
1.00 Days
Knowledge exchange workshop
EXCELERATE
ELIXIR Hub
Berlin
Germany
WP9
WP11 - eLearning
Academia/ Research Institution
NA
NA
19
5
https://elixir.mf.uni-lj.si/course/view.php?id=35
 ELIXIR-CH
1090 5865 Introduction to high-performance computing (sciCORE cluster)
ELIXIR-CH
06.06.2018
 06.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Basel
Switzerland
Academia/ Research Institution
NA
NA
21
1
https://www.sib.swiss/training/course/sciCORE-LinuxHPC-June2018
 ELIXIR-CH
1091 6627 ELIXIR Training Platform All Hands Meeting - workshop
ELIXIR-UK
ELIXIR-NL
ELIXIR-CH
04.06.2018
 04.06.2018
1.00 Days
Knowledge exchange workshop
EXCELERATE
University of Cambridge, DTL, SIB
Berlin
Germany
WP11
Academia/ Research Institution
NA
NA
42
4
https://elixir-europe.org/events/elixir-all-hands-2018
 ELIXIR-UK
1092 6046 DAIS Learnathon
ELIXIR-DE
04.06.2018
 08.06.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
CSBD
Dresden
Germany
Academia/ Research Institution
NA
NA
18
6
https://www.denbi.de/training-archive-sorted-according-by-date/2018/92-dais-lear...
 ELIXIR-DE
1093 5864 Statistical methods for big data in life sciences and health
ELIXIR-CH
04.06.2018
 07.06.2018
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
25
3
https://www.sib.swiss/training/course/2018-06-big-data
 ELIXIR-CH
1094 6675 Challenges of Precision Personalized Medicine
ELIXIR-ES
04.06.2018
 04.06.2018
1.00 Days
Knowledge exchange workshop
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
Spanish National Cancer Research Center (CNIO)
Madrid
Spain
Academia/ Research Institution
Non-Profit Organisation
Healthcare
NA
NA
120
4
https://inb-elixir.es/events/retos-de-la-medicina-personalizada-de-precision-en-...
 ELIXIR-ES
1095 6544 Big Data and Cloud Computing
ELIXIR-UK
01.06.2018
 01.06.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
38
2
https://training.csx.cam.ac.uk/bioinformatics/event/2473649
 ELIXIR-UK
1096 6137 PRACE HPC Workshop 2018 - Parallel computing in bioinformatics research
ELIXIR-ES
ELIXIR-SI
30.05.2018
 30.05.2018
1.00 Days
Knowledge exchange workshop
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
EXCELERATE
University of Ljubljana Faculty of Law
Ljubljana
Slovenia
WP11 - TtR
WP11 - eLearning
Academia/ Research Institution
NA
NA
12
4
https://elixir.mf.uni-lj.si/course/view.php?id=34
 ELIXIR-ES
1097 5862 RNA-seq: From quality control to pathway analysis
ELIXIR-CH
30.05.2018
 31.05.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
22
2
https://www.sib.swiss/training/course/2018-05-rnas-be03
 ELIXIR-CH
1098 5863 First Steps in Parallelization with OpenMP
ELIXIR-CH
30.05.2018
 30.05.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Basel
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
20
1
https://www.sib.swiss/training/course/OpenMP-Basel2018
 ELIXIR-CH
1099 5861 First Steps with UNIX in Life Sciences
ELIXIR-CH
29.05.2018
 29.05.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
11
2
https://www.sib.swiss/training/course/2018-05-unix
 ELIXIR-CH
1100 6045 Data Carpentry Course
ELIXIR-DE
28.05.2018
 29.05.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL, UCD
Dublin
Republic of Ireland
Academia/ Research Institution
NA
NA
35
2
https://www.denbi.de/training-archive-sorted-according-by-date/2018/110-data-car...
 ELIXIR-DE
CSV