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All ELIXIR events (Expanded)

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# Event code Title ELIXIR Node Start date End datesort ascending Duration Event type Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
1201 6260 Entry Level Bioinformatics
ELIXIR-PT
19.02.2018
 23.02.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Instituto Gulbenkian de Ciência / BioData.pt
Oeiras
Portugal
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
12
3
http://gtpb.igc.gulbenkian.pt/bicourses/2018/ELB18F/
 ELIXIR-PT
1202 5845 Intermediate stats: data analysis in practice
ELIXIR-CH
15.02.2018
 16.02.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
30
2
https://www.sib.swiss/training/course/2018-02-intermediate-stats
 ELIXIR-CH
1203 5842 Introduction to high-performance computing (sciCORE cluster)
ELIXIR-CH
14.02.2018
 14.02.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Basel
Switzerland
Academia/ Research Institution
NA
NA
21
1
https://www.sib.swiss/training/course/sciCORE-LinuxHPC-Feb2018
 ELIXIR-CH
1204 5843 Workshop on Computational Biology at biology'18
ELIXIR-CH
14.02.2018
 14.02.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Neuchatel
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
43
4
https://www.dropbox.com/s/4d5bh0pv1svur9l/biology18_booklet.pdf?dl=0
 ELIXIR-CH
1205 5844 First Steps with UNIX in Life Sciences
ELIXIR-CH
14.02.2018
 14.02.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
23
2
https://www.sib.swiss/training/course/2018-02-unix
 ELIXIR-CH
1206 6307 Introductory Linux Tutorial for Life Sciences 3
ELIXIR-SE
ELIXIR-SI
13.02.2018
 15.02.2018
3.00 Days
Training - blended
EXCELERATE
Non-ELIXIR/ Non-EXCELERATE funds
University of Ljubljana Faculty of Medicine, NBIS
Umea
Sweden
WP10
WP11 - eLearning
WP11 - TtR
Academia/ Research Institution
NA
NA
61
12
https://elixir.mf.uni-lj.si/enrol/index.php?id=29
 ELIXIR-SE
1207 6285 Introduction to Bioinformatics usign NGS data
ELIXIR-SE
12.02.2018
 16.02.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS, SciLifeLab
Uppsala
Sweden
Academia/ Research Institution
NA
NA
25
16
https://www.scilifelab.se/events/ngsdatavt18ua/
 ELIXIR-SE
1208 5841 Mass-Spectrometry based Proteomics II: Quantification and Post-Translational Modifications
ELIXIR-CH
09.02.2018
 09.02.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
27
3
https://www.sib.swiss/training/course/2018-02-MS2
 ELIXIR-CH
1209 6312 Think Tank Hackathon
ELIXIR-SI
06.02.2018
 07.02.2018
2.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
University of Ljubljana Faculty of Medicine
Ljubljana
Slovenia
WP10
WP11 - eLearning
Academia/ Research Institution
NA
NA
8
4
https://elixir.mf.uni-lj.si/enrol/index.php?id=31
 ELIXIR-SI
1210 5840 NGS - Genome variant analysis
ELIXIR-CH
06.02.2018
 07.02.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
24
2
https://www.sib.swiss/training/course/2018-02-NGS2
 ELIXIR-CH
1211 5839 Mass Spectrometry-based Proteomics I: Protein Identification
ELIXIR-CH
02.02.2018
 02.02.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
28
3
https://www.sib.swiss/training/course/2018-02-MS1
 ELIXIR-CH
1212 6187 RNA-Sequencing data analysis using the Galaxy platform
ELIXIR-HU
01.02.2018
 02.02.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Debrecen
Debrecen
Hungary
Academia/ Research Institution
NA
NA
22
1
https://www.dropbox.com/s/xbzblultyg36sfv/EFOP_Galaxy_Practical_20180206.pdf?dl=...
 ELIXIR-HU
1213 6514 Introduction to Metabolomics for the Environmental Scientist
ELIXIR-UK
30.01.2018
 31.01.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Birmingham Metabolomics Training Centre University of Birmingham
Birmingham
United Kingdom
Academia/ Research Institution
NA
NA
8
3
https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list...
 ELIXIR-UK
1214 6023 Introductory Command Line Course
ELIXIR-DE
30.01.2018
 31.01.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
NA
28
3
https://www.denbi.de/training-archive-sorted-according-by-date/2018/83-introduct...
 ELIXIR-DE
1215 5874 ELIXIR EXCELERATE Train the Trainer
ELIXIR-CH
ELIXIR-IT
30.01.2018
 31.01.2018
2.00 Days
Training - face to face
EXCELERATE
SIB Swiss Institute of Bioinformatics, IBPM-CNR
Lausanne
Switzerland
WP11 - TtT
Academia/ Research Institution
NA
NA
11
2
https://elixir-iib-training.github.io/website/2018/01/30/train-the-trainer-lausa...
 ELIXIR-CH
1216 6513 High Performance Computing - An introduction
ELIXIR-UK
25.01.2018
 25.01.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
23
1
https://training.csx.cam.ac.uk/bioinformatics/event/2417031
 ELIXIR-UK
1217 6022 MetaProteomeAnalyzer Workshop 2018
ELIXIR-DE
23.01.2018
 23.01.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Magdeburg
Magdeburg
Germany
Academia/ Research Institution
NA
Proteomics
12
3
https://www.denbi.de/training-archive-sorted-according-by-date/2018/81-metaprote...
 ELIXIR-DE
1218 5918 3rd Advanced in silico Drug Design workshop/hackathon 2018
ELIXIR-CZ
23.01.2018
 26.01.2018
4.00 Days
Training - face to face
ELIXIR Node
Palack_ University Olomouc
Olomouc
Czech Republic
Academia/ Research Institution
NA
NA
36
5
http://fch.upol.cz/en/research/conferences-workshops/3add/
 ELIXIR-CZ
1219 5760 Intro to RStudio
ELIXIR-BE
23.01.2018
 23.01.2018
1.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
VIB
Ghent
Belgium
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
14
1
https://orchid00.github.io/RStudioIntroNotebook.html
 ELIXIR-BE
1220 6230 Managing and Integrating Life Science Information
ELIXIR-NL
22.01.2018
 26.01.2018
5.00 Days
Training - face to face
ELIXIR Node
EXCELERATE
Non-ELIXIR/ Non-EXCELERATE funds
BioSB
Amsterdam
Netherlands
WP11 - TtR
Academia/ Research Institution
NA
NA
15
2
https://www.biosb.nl/archive-courses/managing-and-integrating-life-science-infor...
 ELIXIR-NL
1221 6512 An Introduction to Machine Learning
ELIXIR-UK
17.01.2018
 18.01.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
48
3
https://training.csx.cam.ac.uk/bioinformatics/event/2195228
 ELIXIR-UK
1222 6511 Introduction to Unix Shell
ELIXIR-UK
16.01.2018
 16.01.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
1
https://training.csx.cam.ac.uk/bioinformatics/event/2314500
 ELIXIR-UK
1223 6205 Linux shell scripting for high-throughput biological data processing on supercomputers
ELIXIR-IT
16.01.2018
 17.01.2018
2.00 Days
Training - face to face
ELIXIR Node
IBPM-CNR, IBIOM-CNR, CINECA
Rome
Italy
Academia/ Research Institution
NA
NA
17
4
https://elixir-iib-training.github.io/website/2018/01/16/Linux-Shell-Roma.html
 ELIXIR-IT
1224 5838 Statistics for Life Sciences with R
ELIXIR-CH
15.01.2018
 18.01.2018
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
30
2
https://www.sib.swiss/training/course/2018-01-intro-statistics
 ELIXIR-CH
1225 6021 Developer training: Third-party tool integration and method development in OpenMS - EuBIC 2018 developer's meeting
ELIXIR-DE
09.01.2018
 09.01.2018
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Tübingen
Ghent
Belgium
Academia/ Research Institution
NA
Proteomics
7
2
https://www.denbi.de/training-archive-sorted-according-by-date/2018/80-developer...
 ELIXIR-DE
1226 5837 NGS - Quality control, alignment and visualisation
ELIXIR-CH
09.01.2018
 10.01.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bern
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
25
2
https://www.sib.swiss/training/course/2018-01-NGS1
 ELIXIR-CH
1227 6510 Introduction to Matlab for biologists
ELIXIR-UK
08.01.2018
 09.01.2018
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
39
2
https://training.csx.cam.ac.uk/bioinformatics/event/2200830
 ELIXIR-UK
1228 6059 European Galaxy Administrator Workshop 2018
ELIXIR-DE
ELIXIR-FR
ELIXIR-NO
ELIXIR-UK
08.01.2018
 12.01.2018
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Oslo
Norway
Academia/ Research Institution
NA
Galaxy
33
10
https://www.denbi.de/training-archive-sorted-according-by-date/2018/79-european-...
 ELIXIR-DE
1229 6509 Metabolite Identification with the Q Exactive and LTQ Orbitrap
ELIXIR-UK
14.12.2017
 15.12.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Birmingham Metabolomics Training Centre University of Birmingham
Birmingham
United Kingdom
Academia/ Research Institution
NA
NA
5
3
https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list...
 ELIXIR-UK
1230 6508 Using CellProfiler and CellProfiler Analyst to analyse biological images
ELIXIR-UK
13.12.2017
 14.12.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
33
1
https://training.csx.cam.ac.uk/bioinformatics/event/1923396
 ELIXIR-UK
1231 6506 Image Analysis for Biologists
ELIXIR-UK
11.12.2017
 12.12.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
3
https://training.csx.cam.ac.uk/bioinformatics/event/1923480
 ELIXIR-UK
1232 6507 Introduction to Linux and Workflows for Biologists
ELIXIR-UK
11.12.2017
 15.12.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Edingburgh Genomics University of Edingburgh
Edingburgh
United Kingdom
Academia/ Research Institution
NA
NA
21
2
https://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1233 5835 Advanced R
ELIXIR-CH
11.12.2017
 13.12.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
27
2
https://www.sib.swiss/training/course/2017-12-advanced-r
 ELIXIR-CH
1234 5836 Statistics for Life Scientists
ELIXIR-CH
11.12.2017
 14.12.2017
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Basel
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
30
3
https://www.sib.swiss/training/course/stats-basel2017
 ELIXIR-CH
1235 6505 Biological Imaging Data Processing for Data Scientists
ELIXIR-UK
08.12.2017
 08.12.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
12
3
https://training.csx.cam.ac.uk/bioinformatics/event/2280783
 ELIXIR-UK
1236 6504 Biological Imaging Data Management for Life Scientists
ELIXIR-UK
07.12.2017
 07.12.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
22
3
https://training.csx.cam.ac.uk/bioinformatics/event/2239247
 ELIXIR-UK
1237 6020 Tool-Training for Proteomics
ELIXIR-DE
07.12.2017
 07.12.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Ruhr University Bochum
Bochum
Germany
Academia/ Research Institution
NA
Proteomics
20
4
https://www.denbi.de/training-archive-sorted-according-by-date/2017/256-tool-tra...
 ELIXIR-DE
1238 5834 High Performance Computing (HPC) in Life Sciences: Vital-IT Infrastructure Training
ELIXIR-CH
07.12.2017
 07.12.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
23
3
https://www.sib.swiss/training/course/2017-12-hpc-training
 ELIXIR-CH
1239 6503 Multiple biofluid and tissue types, from sample preparation to analysis strategies
ELIXIR-UK
06.12.2017
 08.12.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Birmingham Metabolomics Training Centre University of Birmingham
Birmingham
United Kingdom
Academia/ Research Institution
NA
NA
2
3
https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list...
 ELIXIR-UK
1240 6502 Working with Python: functions and modules
ELIXIR-UK
06.12.2017
 06.12.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
33
3
https://training.csx.cam.ac.uk/bioinformatics/event/2234818
 ELIXIR-UK
1241 6501 An Introduction to Solving Biological Problems with PERL
ELIXIR-UK
04.12.2017
 05.12.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
10
2
https://training.csx.cam.ac.uk/bioinformatics/event/2233387
 ELIXIR-UK
1242 6019 Introduction to Software Deployment in Virtualized Research Environments
ELIXIR-DE
04.12.2017
 04.12.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Freiburg
Germany
Academia/ Research Institution
NA
NA
12
1
https://www.denbi.de/training-archive-sorted-according-by-date/2017/255-introduc...
 ELIXIR-DE
1243 6750 Analysis of Differential Expression with RNAseq
ELIXIR-PT
04.12.2017
 07.12.2017
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Instituto Gulbenkian de Ciência
Oeiras
Portugal
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
18
3
http://gtpb.igc.gulbenkian.pt/bicourses/2017/ADER17S/index.html
 ELIXIR-PT
1244 6018 Hackathon – Fiji, ImageJ, and KNIME development 2017
ELIXIR-DE
03.12.2017
 16.12.2017
14.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
CSBD
Dresden
Germany
Academia/ Research Institution
NA
NA
41
5
https://www.denbi.de/training-archive-sorted-according-by-date/2017/257-hackatho...
 ELIXIR-DE
1245 6500 Introduction to Metabolomics for the Clinical Scientist
ELIXIR-UK
01.12.2017
 01.12.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Birmingham Metabolomics Training Centre University of Birmingham
Birmingham
United Kingdom
Academia/ Research Institution
NA
NA
5
2
https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list...
 ELIXIR-UK
1246 6499 Introduction to RNA-seq Data Analysis
ELIXIR-UK
30.11.2017
 01.12.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Edingburgh Genomics University of Edingburgh
Edingburgh
United Kingdom
Academia/ Research Institution
NA
NA
12
4
https://genomics.ed.ac.uk/services/training
 ELIXIR-UK
1247 6017 DNA Methylation: Design to Discovery
ELIXIR-DE
30.11.2017
 01.12.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Saar University
Saarbrücken
Germany
Academia/ Research Institution
NA
Human Data
8
1
https://www.denbi.de/training-archive-sorted-according-by-date/2017/254-dna-meth...
 ELIXIR-DE
1248 6498 Data Analysis and Visualisation in R
ELIXIR-UK
29.11.2017
 29.11.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
37
2
https://training.csx.cam.ac.uk/bioinformatics/event/2234798
 ELIXIR-UK
1249 5833 Proteogenomics and immunopeptidomics
ELIXIR-CH
29.11.2017
 01.12.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics, CUSO/StarOmics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
27
9
https://www.sib.swiss/training/course/2017-11-proteogenomics-immunopeptidomics
 ELIXIR-CH
1250 6624 Quality and Impact subtask face to face meeting
ELIXIR-UK
ELIXIR-EMBL-EBI
28.11.2017
 28.11.2017
1.00 Days
Knowledge exchange workshop
EXCELERATE
University of Cambridge, EMBL-EBI
Stansted
United Kingdom
WP11 - QandI
Academia/ Research Institution
NA
NA
20
3
https://docs.google.com/document/d/1dK4liPu6UGYZx6QpqkAPL9PZtH5EPfzwtVRQpCufog8/...
 ELIXIR-UK
CSV