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All ELIXIR events (Expanded)

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# Event code Title ELIXIR Node Start date End date Duration Event typesort ascending Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
1301 6670 NGS - Quality control, Alignment, Visualisation
ELIXIR-CH
12.06.2019
 14.06.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB
Bern
Switzerland
WP11
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
22
1
https://www.sib.swiss/training/course/2019-06-NGS6
 ELIXIR-CH
1302 6671 Introduction to high-performance computing (sciCORE cluster)
ELIXIR-CH
19.06.2019
 19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB
Basel
Switzerland
WP11
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
1
https://www.sib.swiss/training/course/sciCORE-LinuxHPC-Jun2019
 ELIXIR-CH
1303 6672 ELIXIR-SIB Data Carpentry with R
ELIXIR-CH
01.07.2019
 02.07.2019
2.00 Days
Training - face to face
EXCELERATE
ELIXIR Node
SIB
Zurich
Switzerland
WP11 - TtR
WP11
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
4
https://www.sib.swiss/training/course/2019-07-elixir-sib-dc
 ELIXIR-CH
1304 6677 Software Carpentry: R for Reproducible Scientific Analysis
ELIXIR-ES
06.06.2019
 07.06.2019
2.00 Days
Training - face to face
EXCELERATE
ELIXIR Node
Spanish National Cancer Research Center (CNIO), Barcelona Supercomputing Center (BSC)
Madrid
Spain
WP11 - TtR
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
20
5
https://mariakotouza.github.io/2019-06-06-elixir-inb-cnio/
 ELIXIR-ES
1305 6678 Image Processing for Electron Microscopy and hybrid modelling
ELIXIR-ES
08.07.2019
 11.07.2019
4.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
National Center for Biotechnology (CNB)
Madrid
Spain
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
20
4
http://i2pc.es/instruct-course-on-image-processing-for-electron-microscopy-and-h...
 ELIXIR-ES
1306 6679 From reads to disease variants: GATK workshop and Disease variant priorization tutorial
ELIXIR-ES
21.10.2019
 25.10.2019
5.00 Days
Training - face to face
ELIXIR Node
Fundación Progreso y Salud - FPS, Broad Institute
Granada
Spain
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
32
7
http://courseswiki.clinbioinfosspa.es/gatk2019/start
 ELIXIR-ES
1307 6680 SeqAn & OpenMS (CIBI/de.NBI) Integration Workshop
ELIXIR-DE
18.03.2019
 18.03.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
FU Berlin
Berlin
Germany
Academia/ Research Institution
NA
Proteomics
12
2
https://www.denbi.de/training-archive-sorted-according-by-date/580-seqan-openms-...
 ELIXIR-DE
1308 6681 Summer school on Integration of Large Scale Lipidomics Data in Systems Medicine Research (LipoSysMed)
ELIXIR-DE
18.03.2019
 22.03.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
ISAS Dortmund
Leipzig
Germany
Academia/ Research Institution
NA
Proteomics
Metabolomics
25
13
https://www.denbi.de/training-archive-sorted-according-by-date/551-liposysmed-in...
 ELIXIR-DE
1309 6682 Tools for Systems biology modeling and data exchange: COPASI, CellNetAnalyzer, SABIO-RK, FAIRDOMHub/SEEK
ELIXIR-DE
18.03.2019
 20.03.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
HITS Heidelberg
Heidelberg
Germany
Academia/ Research Institution
NA
NA
16
7
https://www.denbi.de/training-archive-sorted-according-by-date/467-tools-for-sys...
 ELIXIR-DE
1310 6683 Spring School “Computational Biology Starter”
ELIXIR-DE
20.03.2019
 22.03.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Gatersleben
Gatersleben
Germany
Academia/ Research Institution
NA
Plant Sciences
23
8
https://www.denbi.de/training-archive-sorted-according-by-date/440-spring-school...
 ELIXIR-DE
1311 6685 Data Interpretation of RNASeq and Bisulfite Sequencing Data in Cancer Research
ELIXIR-DE
27.03.2019
 29.03.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
DKFZ
Heidelberg
Germany
Academia/ Research Institution
NA
Human Data
24
3
https://www.denbi.de/training-archive-sorted-according-by-date/74-data-interpret...
 ELIXIR-DE
1312 6686 Tool-Training for Proteomics – Proteomic Forum 2019
ELIXIR-DE
28.03.2019
 28.03.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Ruhr University Bochum
Potsdam
Germany
Academia/ Research Institution
NA
Proteomics
54
4
https://www.denbi.de/training-archive-sorted-according-by-date/550-tool-training...
 ELIXIR-DE
1313 6687 de.NBI CompMS metaRbolomics Hackathon
ELIXIR-DE
01.04.2019
 03.04.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
IPB Halle
Lutherstadt Wittenberg
Germany
Academia/ Research Institution
NA
Metabolomics
23
3
https://www.denbi.de/training-archive-sorted-according-by-date/466-de-nbi-compms...
 ELIXIR-DE
1314 6689 Introduction to Python Programming
ELIXIR-DE
09.04.2019
 10.04.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL Heidelberg
Heidelberg
Germany
Academia/ Research Institution
NA
NA
21
3
https://www.denbi.de/training-archive-sorted-according-by-date/485-introduction-...
 ELIXIR-DE
1315 6692 Proteomics and Metabolomics with OpenMS
ELIXIR-DE
29.04.2019
 01.05.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Tübingen
Boston
United States
Academia/ Research Institution
NA
Proteomics
Metabolomics
40
3
https://www.denbi.de/training-archive-sorted-according-by-date/498-proteomics-an...
 ELIXIR-DE
1316 6694 Single-Cell Omics workshop
ELIXIR-DE
12.05.2019
 18.05.2019
7.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
NA
16
3
https://www.denbi.de/training-archive-sorted-according-by-date/627-single-cell-o...
 ELIXIR-DE
1317 6696 5th de.NBI Genomics training course
ELIXIR-DE
20.05.2019
 22.05.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
JLU Gießen
Gießen
Germany
Academia/ Research Institution
NA
NA
18
8
https://www.denbi.de/training-archive-sorted-according-by-date/546-5th-de-nbi-ge...
 ELIXIR-DE
1318 6697 Introduction to Version Control with Git & GitHub
ELIXIR-DE
21.05.2019
 21.05.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
NA
29
2
https://www.denbi.de/training-archive-sorted-according-by-date/484-introduction-...
 ELIXIR-DE
1319 6698 Phylogenetic reconstruction course
ELIXIR-DE
21.05.2019
 21.05.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Kiel
Kiel
Germany
Academia/ Research Institution
NA
NA
19
2
https://www.denbi.de/training-archive-sorted-according-by-date/521-phylogenetic-...
 ELIXIR-DE
1320 6699 Computational genomics course for hands-on data analysis
ELIXIR-DE
22.05.2019
 24.05.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
MDC Berlin
Berlin
Germany
Academia/ Research Institution
NA
NA
20
4
https://www.denbi.de/training-archive-sorted-according-by-date/559-computational...
 ELIXIR-DE
1321 6700 DNA Methylation: Design to Discovery 2019
ELIXIR-DE
23.05.2019
 24.05.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Saar University
Saarbrücken
Germany
Academia/ Research Institution
NA
NA
7
1
https://www.denbi.de/training-archive-sorted-according-by-date/487-dna-methylati...
 ELIXIR-DE
1322 6701 RNA-seq workshop for beginners: from sequences to visualization using Galaxy
ELIXIR-DE
ELIXIR-NL
11.06.2019
 12.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Freiburg
Germany
Academia/ Research Institution
NA
Galaxy
40
2
https://www.denbi.de/training-archive-sorted-according-by-date/628-rna-seq-works...
 ELIXIR-DE
1323 6702 The Linux Command Line: From Basic Commands to Shell Scripting
ELIXIR-DE
13.06.2019
 13.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
UKE Hamburg
Hamburg
Germany
Academia/ Research Institution
NA
NA
9
3
https://www.denbi.de/training-archive-sorted-according-by-date/593-the-linux-com...
 ELIXIR-DE
1324 6703 Applied Metaproteomics Workshop 2019
ELIXIR-DE
17.06.2019
 21.07.2019
35.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Magdeburg
Magdeburg
Germany
Academia/ Research Institution
NA
Proteomics
9
4
https://www.denbi.de/training-archive-sorted-according-by-date/576-applied-metap...
 ELIXIR-DE
1325 6706 Image Processing & Analysis with ilastik
ELIXIR-DE
27.06.2019
 27.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBl Heidelberg
Heidelberg
Germany
Academia/ Research Institution
NA
NA
19
1
https://www.denbi.de/training-archive-sorted-according-by-date/633-image-process...
 ELIXIR-DE
1326 6707 Cluster Computing for Life Sciences
ELIXIR-NL
23.04.2019
 24.04.2019
2.00 Days
Training - face to face
EXCELERATE
SURF
Utrecht
Netherlands
WP11 - TtR
Academia/ Research Institution
NA
NA
22
3
https://carlos-tb.github.io/2019-04-23-Cluster-Computing-ELIXIR/
 ELIXIR-NL
1327 6708 Deep Learning for Life Sciences
ELIXIR-NL
09.05.2019
 09.05.2019
1.00 Days
Training - face to face
EXCELERATE
SURFsara
Utrecht
Netherlands
WP11 - TtR
Academia/ Research Institution
NA
NA
25
3
https://carlos-tb.github.io/2019-05-09-Deep-Learning-ELIXIR/
 ELIXIR-NL
1328 6709 Helis Course: FAIR Data Stewardship - digital data scholarship for wetlab scientists
ELIXIR-NL
27.05.2019
 29.05.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
DTL
Niel
Belgium
Academia/ Research Institution
Industry
NA
NA
10
7
https://www.aanmelder.nl/helis-fair-data-stewardship-course
 ELIXIR-NL
1329 6712 Statistics in Omics
ELIXIR-NL
24.06.2019
 28.06.2019
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
BioSB
Amsterdam
Netherlands
Academia/ Research Institution
NA
NA
30
5
https://www.biosb.nl/archive-courses/course-statistics-in-omics/
 ELIXIR-NL
1330 6713 An Introduction to Solving Biological Problems with R
ELIXIR-UK
25.03.2019
 26.03.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
4
https://training.csx.cam.ac.uk/bioinformatics/event/2673375
 ELIXIR-UK
1331 6714 Introduction to RNA-seq data analysis
ELIXIR-UK
27.03.2019
 29.03.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
44
4
https://training.csx.cam.ac.uk/bioinformatics/event/2673403
 ELIXIR-UK
1332 6715 Data Carpentry in R
ELIXIR-UK
01.04.2019
 02.04.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
42
4
https://training.csx.cam.ac.uk/bioinformatics/event/2857971
 ELIXIR-UK
1333 6716 Molecular Phylogenetics
ELIXIR-UK
03.04.2019
 05.04.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
44
4
https://training.csx.cam.ac.uk/bioinformatics/event/2823369
 ELIXIR-UK
1334 6717 Data Science in Python
ELIXIR-UK
08.04.2019
 09.04.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
37
3
https://training.csx.cam.ac.uk/bioinformatics/event/2823179
 ELIXIR-UK
1335 6718 Transcriptome Analysis for Non-Model Organisms
ELIXIR-UK
15.04.2019
 17.04.2019
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
22
2
https://training.csx.cam.ac.uk/bioinformatics/event/2846751
 ELIXIR-UK
1336 6719 ELIXIR-EXCELERATE Train the Trainer
ELIXIR-UK
ELIXIR-EMBL-EBI
25.04.2019
 26.04.2019
2.00 Days
Training - face to face
EXCELERATE
University of Cambridge
Cambridge
United Kingdom
WP11 - TtT
Academia/ Research Institution
NA
NA
11
2
https://training.csx.cam.ac.uk/bioinformatics/event/2901788
 ELIXIR-UK
1337 6720 ChIP-seq and ATAC-seq analysis
ELIXIR-UK
02.05.2019
 03.05.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
42
4
https://training.csx.cam.ac.uk/bioinformatics/event/2836139
 ELIXIR-UK
1338 6721 An Introduction to Solving Biological Problems with R
ELIXIR-UK
13.05.2019
 14.05.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
41
4
https://training.csx.cam.ac.uk/bioinformatics/event/2823227
 ELIXIR-UK
1339 6722 Statistics for Biologists in R
ELIXIR-UK
15.05.2019
 16.05.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
42
1
https://training.csx.cam.ac.uk/bioinformatics/event/2815679
 ELIXIR-UK
1340 6723 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
20.05.2019
 21.05.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
36
2
https://training.csx.cam.ac.uk/bioinformatics/event/2823212
 ELIXIR-UK
1341 6724 Analysis of single cell RNA-seq data
ELIXIR-UK
23.05.2019
 24.05.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
45
8
https://training.csx.cam.ac.uk/bioinformatics/event/2823386
 ELIXIR-UK
1342 6725 Train the Trainer for Image Analysts
ELIXIR-UK
30.05.2019
 31.05.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
16
1
https://training.csx.cam.ac.uk/bioinformatics/event/2956475
 ELIXIR-UK
1343 6726 COSMIC: Integrating and interpreting the world's knowledge of somatic mutations in cancer
ELIXIR-UK
04.06.2019
 04.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
25
2
https://training.csx.cam.ac.uk/bioinformatics/event/2887770
 ELIXIR-UK
1344 6727 Data Manipulation and Visualisation in R
ELIXIR-UK
10.06.2019
 10.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
42
4
https://training.csx.cam.ac.uk/bioinformatics/event/2941927
 ELIXIR-UK
1345 6728 An Introduction to Solving Biological Problems with R
ELIXIR-UK
11.06.2019
 12.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
27
2
https://training.csx.cam.ac.uk/bioinformatics/event/2823243
 ELIXIR-UK
1346 6729 Data Science in Python
ELIXIR-UK
13.06.2019
 14.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
35
3
https://training.csx.cam.ac.uk/bioinformatics/event/2823193
 ELIXIR-UK
1347 6730 An Introduction to MATLAB for biologists
ELIXIR-UK
17.06.2019
 18.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
26
3
https://training.csx.cam.ac.uk/bioinformatics/event/2848057
 ELIXIR-UK
1348 6731 Biological data analysis using InterMine (User Interface)
ELIXIR-UK
19.06.2019
 19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
8
1
https://training.csx.cam.ac.uk/bioinformatics/event/2874533
 ELIXIR-UK
1349 6732 Biological data analysis using the InterMine API
ELIXIR-UK
19.06.2019
 19.06.2019
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
11
2
https://training.csx.cam.ac.uk/bioinformatics/event/2876900
 ELIXIR-UK
1350 6733 Protein Structure Analysis
ELIXIR-UK
20.06.2019
 21.06.2019
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
16
5
https://training.csx.cam.ac.uk/bioinformatics/event/2884552
 ELIXIR-UK
CSV