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All ELIXIR events (Expanded)

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# Event code Title ELIXIR Node Start date End datesort descending Duration Event type Funding Organising Institution/s City Country EXCELERATE WP Target audience Additional ELIXIR Platforms involved ELIXIR Communities involved Number of participants Number of trainers/ facilitators Url to event page/ agenda Main organiser
401 6477 An Introduction to Solving Biological Problems with Python
ELIXIR-UK
14.09.2017
 15.09.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
34
2
https://training.csx.cam.ac.uk/bioinformatics/event/2168445
 ELIXIR-UK
402 5997 Computational Mass Spectrometry - GCB 2017
ELIXIR-DE
18.09.2017
 18.09.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Tübingen
Tübingen
Germany
Academia/ Research Institution
NA
Proteomics
Metabolomics
8
2
https://www.denbi.de/training-archive-sorted-according-by-date/2017/236-computat...
 ELIXIR-DE
403 5998 4th Galaxy high-throughput sequencing (HTS) data analysis workshop
ELIXIR-DE
18.09.2017
 22.09.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Freiburg
Germany
Academia/ Research Institution
NA
Galaxy
25
5
https://www.denbi.de/training-archive-sorted-according-by-date/2017/237-4th-gala...
 ELIXIR-DE
404 6116 "Interdisciplinary perspectives on bioinformatics training: lessons from cognitive science, biostatistics, and education” lecture by Rochelle Tractenberg
ELIXIR-EE
18.09.2017
 18.09.2017
1.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
University of Tartu
Tartu
Estonia
8
1
https://elixir.ut.ee/node/116
 ELIXIR-EE
405 5822 Slurm Hackathon (sciCORE)
ELIXIR-CH
19.09.2017
 19.09.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Basel
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
14
2
https://www.sib.swiss/training/course/slurm_scicore_sept2017
 ELIXIR-CH
406 6117 “Learning goals, teaching goals, and assessment” workshop by Rochelle Tractenberg
ELIXIR-EE
19.09.2017
 19.09.2017
1.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
University of Tartu
Tartu
Estonia
5
1
https://elixir.ut.ee/node/116
 ELIXIR-EE
407 6257 Large-scale bioinformatics for Immuno-Oncology
ELIXIR-PT
20.09.2017
 22.09.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Instituto Gulbenkian de Ciência
Oeiras
Portugal
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
15
2
http://gtpb.igc.gulbenkian.pt/bicourses/2017/IO17/index.html
 ELIXIR-PT
408 5823 Secure management of sensitive human data
ELIXIR-CH
20.09.2017
 20.09.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
24
2
https://www.sib.swiss/training/course/2017-09-secure-data-management
 ELIXIR-CH
409 5999 de.NBI, DAIS & KNIME Hackathon
ELIXIR-DE
20.09.2017
 29.09.2017
10.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
University of Konstanz
Konstanz
Germany
Academia/ Research Institution
NA
NA
24
3
https://www.denbi.de/training-archive-sorted-according-by-date/2017/238-de-nbi-d...
 ELIXIR-DE
410 6478 Introduction to RNA-seq Data Analysis
ELIXIR-UK
21.09.2017
 22.09.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Edingburgh Genomics University of Edingburgh
Edingburgh
United Kingdom
Academia/ Research Institution
NA
NA
12
4
https://genomics.ed.ac.uk/services/training
 ELIXIR-UK
411 6168 Annotation and analysis of prokaryotic genomes using the MicroScope platform
ELIXIR-FR
24.09.2017
 28.09.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
French Institute of Bioinformatics (IFB), Genoscope
Essonne
France
Academia/ Research Institution
https://tess.elixir-europe.org/events/annotation-and-analysis-of-procaryotic-gen...
 ELIXIR-FR
412 6228 BioSB Course Pattern Recognition
ELIXIR-NL
25.09.2017
 29.09.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
BioSB
Amsterdam
Netherlands
Academia/ Research Institution
NA
NA
25
3
https://www.biosb.nl/archive-courses/course-pattern-recognition-5th-edition/
 ELIXIR-NL
413 6284 Introduction to Bioinformatics using NGS data
ELIXIR-SE
25.09.2017
 29.09.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
NBIS, SciLifeLab
Lund
Sweden
Academia/ Research Institution
NA
NA
20
7
https://www.scilifelab.se/events/ngsdata_lund_ht17/
 ELIXIR-SE
414 5824 SIB PhD Training Network Retreat - 10 Years
ELIXIR-CH
25.09.2017
 27.09.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Bienne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
17
3
https://www.sib.swiss/training/who-can-benefit
 ELIXIR-CH
415 6000 de.NBI Late Summer School 2017 - Computational genomics and RNA biology
ELIXIR-DE
25.09.2017
 29.09.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Berlin
Germany
Academia/ Research Institution
NA
Galaxy
20
12
https://www.denbi.de/training-archive-sorted-according-by-date/2017/242-de-nbi-l...
 ELIXIR-DE
416 6001 PLANT 2030 Summer School – Basic Bioinformatics training for Biologists
ELIXIR-DE
25.09.2017
 27.09.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
IPK Gatersleben
Gatersleben
Germany
Academia/ Research Institution
NA
Plant Sciences
25
6
http://dx.doi.org/10.5447/IPK/2017/17
 ELIXIR-DE
417 6002 SeqAn User Meeting 2017
ELIXIR-DE
25.09.2017
 27.09.2017
3.00 Days
Knowledge exchange workshop
Non-ELIXIR/ Non-EXCELERATE funds
FU Berlin
Halle
Germany
Academia/ Research Institution
NA
NA
15
3
https://www.denbi.de/training-archive-sorted-according-by-date/2017/240-seqan-us...
 ELIXIR-DE
418 6003 OpenMS User Meeting 2017
ELIXIR-DE
25.09.2017
 27.09.2017
3.00 Days
Knowledge exchange workshop
Non-ELIXIR/ Non-EXCELERATE funds
University of Tübingen
Halle
Germany
Academia/ Research Institution
NA
Proteomics
Metabolomics
24
3
https://www.denbi.de/training-archive-sorted-according-by-date/2017/241-openms-u...
 ELIXIR-DE
419 6479 Cambridge Bioinformatics Hackathon
ELIXIR-UK
25.09.2017
 27.09.2017
3.00 Days
Hackathon
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
44
2
https://training.csx.cam.ac.uk/bioinformatics/event/2196078
 ELIXIR-UK
420 6004 Data Interpretation of RNASeq and Bisulfite Sequencing Data in Cancer Research
ELIXIR-DE
27.09.2017
 29.09.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
Human Data
20
3
https://www.denbi.de/training-archive-sorted-according-by-date/2017/243-data-int...
 ELIXIR-DE
421 6202 RNA-seq data analysis
ELIXIR-IT
27.09.2017
 29.09.2017
3.00 Days
Training - face to face
ELIXIR Node
Non-ELIXIR/ Non-EXCELERATE funds
University of Salerno, IBPM-CNR, CLNS@Sapienza
Salerno
Italy
Academia/ Research Institution
NA
NA
24
3
https://elixir-iib-training.github.io/website/2017/09/27/RNA-seq-Salerno.html
 ELIXIR-IT
422 6203 ELIXIR EXCELERATE Train the Trainer
ELIXIR-IT
27.09.2017
 29.09.2017
3.00 Days
Training - face to face
EXCELERATE
CNR, University of Salerno
Salerno
Italy
WP11 - TtT
Academia/ Research Institution
NA
NA
11
2
https://elixir-iib-training.github.io/website/2017/09/27/train-the-trainer-saler...
 ELIXIR-IT
423 5825 NGS bioinformatics quality control and variant annotation for cancer diagnosis / Contrôle qualité bioinformatique et annotation de variants NGS pour le diagnostic du cancer
ELIXIR-CH
28.09.2017
 28.09.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics, Clinical Pathology Division of the University Hospital of Geneva (HUG)
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
27
2
https://www.sib.swiss/training/course/2017-09-ngs-clinical-qc-annot
 ELIXIR-CH
424 6480 An Introduction to Machine Learning in R
ELIXIR-UK
28.09.2017
 29.09.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
43
3
https://training.csx.cam.ac.uk/bioinformatics/event/2116325
 ELIXIR-UK
425 6481 R object-oriented programming and package development
ELIXIR-UK
02.10.2017
 02.10.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
17
2
https://training.csx.cam.ac.uk/bioinformatics/event/2168472
 ELIXIR-UK
426 5826 Slurm Hackathon (sciCORE)
ELIXIR-CH
04.10.2017
 04.10.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Basel
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
10
2
https://www.sib.swiss/training/course/slurm-scicore-oct2017
 ELIXIR-CH
427 6005 A primer for RNA-Seq processing, interpreting and visualization
ELIXIR-DE
04.10.2017
 06.10.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Freiburg
Freiburg
Germany
Academia/ Research Institution
NA
Galaxy
12
3
https://www.denbi.de/training-archive-sorted-according-by-date/2017/113-a-primer...
 ELIXIR-DE
428 5759 Python for Data Processing
ELIXIR-BE
05.10.2017
 06.10.2017
2.00 Days
Training - face to face
ELIXIR Node
University of Hasselt
Leuven
Belgium
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
23
1
https://www.dtls.nl/courses/python-data-processing/
 ELIXIR-BE
429 5827 Bioinformatics of long read sequencing
ELIXIR-CH
05.10.2017
 06.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Zurich
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
35
10
https://www.sib.swiss/training/course/2017-11-longreads
 ELIXIR-CH
430 6482 Introduction to Scientific Figure Design
ELIXIR-UK
06.10.2017
 06.10.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
34
2
https://training.csx.cam.ac.uk/bioinformatics/event/2193694
 ELIXIR-UK
431 6169 BioContainers Hackathon: Reproducible Bioinformatics
ELIXIR-FR
09.10.2017
 11.10.2017
3.00 Days
Hackathon
EXCELERATE
French Institute of Bioinformatics (IFB)
Paris
France
WP11 - TtD
Academia/ Research Institution
Tools
NA
30
10
https://www.elixir-europe.org/events/elixir-biocontainers-hackathon
 ELIXIR-FR
432 6006 Introduction to BRENDA & ProteinPlus
ELIXIR-DE
11.10.2017
 12.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
TU Braunschweig
Braunschweig
Germany
Academia/ Research Institution
NA
NA
6
4
https://www.denbi.de/training-archive-sorted-according-by-date/2017/244-introduc...
 ELIXIR-DE
433 6483 Working with Python: functions and modules
ELIXIR-UK
12.10.2017
 12.10.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
36
2
https://training.csx.cam.ac.uk/bioinformatics/event/2168523
 ELIXIR-UK
434 6484 Quality Assurance and Quality Control in Metabolomics
ELIXIR-UK
12.10.2017
 13.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Birmingham Metabolomics Training Centre University of Birmingham
Birmingham
United Kingdom
Academia/ Research Institution
NA
NA
2
3
https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list...
 ELIXIR-UK
435 5828 First Steps with R in Life Sciences
ELIXIR-CH
16.10.2017
 17.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Lausanne
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
29
2
https://www.sib.swiss/training/course/2017-10-firststepsr
 ELIXIR-CH
436 6485 Metabolomics Data Processing and Data Analysis
ELIXIR-UK
16.10.2017
 12.11.2017
28.00 Days
Training - elearning
Non-ELIXIR/ Non-EXCELERATE funds
Birmingham Metabolomics Training Centre University of Birmingham
Online
Online
Academia/ Research Institution
NA
NA
34
4
https://www.birmingham.ac.uk/facilities/metabolomics-training-centre/course-list...
 ELIXIR-UK
437 6007 Software Carpentry Workshop
ELIXIR-DE
18.10.2017
 20.10.2017
3.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
EMBL
Heidelberg
Germany
Academia/ Research Institution
NA
NA
25
5
https://www.denbi.de/training-archive-sorted-according-by-date/2017/176-software...
 ELIXIR-DE
438 6204 NETTAB 2017 Tutorial on PPI networks
ELIXIR-IT
18.10.2017
 19.10.2017
2.00 Days
Training - face to face
ELIXIR Node
University of Rome, Institute Cuire, IBPM-CNR
Palermo
Italy
Academia/ Research Institution
NA
NA
14
3
https://elixir-iib-training.github.io/website/2017/10/18/Nettab-Palermo.html
 ELIXIR-IT
439 6486 High Performance Computing: An introduction
ELIXIR-UK
19.10.2017
 19.10.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
11
1
https://training.csx.cam.ac.uk/bioinformatics/event/2302301
 ELIXIR-UK
440 6273 Genome Assembly and Annotation course 3
ELIXIR-BE
ELIXIR-FR
ELIXIR-NO
ELIXIR-PT
ELIXIR-SE
ELIXIR-SI
23.10.2017
 27.10.2017
5.00 Days
Training - face to face
EXCELERATE
Instituto Gulbenkian de Ciência
Oeiras
Portugal
WP11 - eLearning
WP11 - TtR
WP10
Academia/ Research Institution
NA
NA
22
10
https://elixir.mf.uni-lj.si/course/view.php?id=25
 ELIXIR-PT
441 5829 Best practices in programming 2017
ELIXIR-CH
23.10.2017
 24.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Basel
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
11
6
https://www.sib.swiss/training/course/best-practices-in-programming-2017
 ELIXIR-CH
442 6487 Introduction to RNA-seq and ChIP-seq data analysis
ELIXIR-UK
25.10.2017
 26.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
44
4
https://training.csx.cam.ac.uk/bioinformatics/event/2197137
 ELIXIR-UK
443 6488 Introduction to RNA-seq Data Analysis
ELIXIR-UK
26.10.2017
 27.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Edingburgh Genomics University of Edingburgh
Edingburgh
United Kingdom
Academia/ Research Institution
NA
NA
12
4
https://genomics.ed.ac.uk/services/training
 ELIXIR-UK
444 6131 Introduction to metagenomics analysis
ELIXIR-ES
27.10.2017
 28.10.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
American Society for Microbiology, H3ABioNet, University of Dhar el Marhaz
Fes
Morocco
WP11
Academia/ Research Institution
NA
NA
40
2
https://elixir-europe.org/about-us/who-we-are/nodes/spain
 ELIXIR-ES
445 6489 Biological data analysis using InterMine
ELIXIR-UK
27.10.2017
 27.10.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
8
1
https://training.csx.cam.ac.uk/bioinformatics/event/2214502
 ELIXIR-UK
446 6229 BioSB Course Protein Structures
ELIXIR-NL
30.10.2017
 03.11.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
BioSB
Nijmegen
Netherlands
Academia/ Research Institution
NA
NA
8
4
https://www.biosb.nl/archive-courses/protein-structures-production-prowess-power...
 ELIXIR-NL
447 6490 Analysis of single cell RNA-seq data
ELIXIR-UK
31.10.2017
 01.11.2017
2.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
University of Cambridge
Cambridge
United Kingdom
Academia/ Research Institution
NA
NA
40
3
https://training.csx.cam.ac.uk/bioinformatics/event/2184854
 ELIXIR-UK
448 6126 ELIXIR EXCELERATE Train the Trainer
ELIXIR-EMBL-EBI
ELIXIR-DE
01.11.2017
 01.11.2017
1.00 Days
Training - face to face
EXCELERATE
EMBL-EBI
Heidelberg
Germany
WP11 - TtT
Academia/ Research Institution
12
https://github.com/TrainTheTrainer/EXCELERATE-TtT/blob/master/TtT_session_1.md
 ELIXIR-EMBL-EBI
449 5830 Snakemake for scalable and reproducible data analysis
ELIXIR-CH
03.11.2017
 03.11.2017
1.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
SIB Swiss Institute of Bioinformatics
Zurich
Switzerland
Academia/ Research Institution
Industry
Healthcare
Non-Profit Organisation
NA
NA
40
2
https://www.sib.swiss/training/course/2017-11-snakemake
 ELIXIR-CH
450 6751 Entry Level Bioinformatics
ELIXIR-PT
06.11.2017
 10.11.2017
5.00 Days
Training - face to face
Non-ELIXIR/ Non-EXCELERATE funds
Instituto Gulbenkian de Ciência
Oeiras
Portugal
Academia/ Research Institution
Industry
Non-Profit Organisation
Healthcare
NA
NA
18
3
http://gtpb.igc.gulbenkian.pt/bicourses/2017/ELB17S/index.html
 ELIXIR-PT
CSV